RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 MAFIPQ8WZ33 124 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 FAM168AQ92567 244 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 NEIL1Q96FI4 390 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-208ENST00000520561 COQ2Q96H96 371 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 SHARPINQ9H0F6 387 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 KCNIP1Q9NZI2 227 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 DUX4Q9UBX2 424 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 LPAR3Q9UBY5 353 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 MIOXQ9UGB7 285 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 ZNF230Q9UIE0 474 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-208ENST00000520561 KIF25Q9UIL4 384 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 ADGRG4Q8IZF6 3080 aa7.46□□□□□ -1.22
CSMD1-208ENST00000520561 ODAMA1E959 279 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 NAP1L6A6NFF2 107 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 DVL1O14640 695 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 LYRM1O43325 122 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 RAB3DO95716 219 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 MT-ND4P03905 459 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 NAT1P18440 290 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 GIFP27352 417 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 HLA-DMAP28067 261 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 ERP29P30040 261 aaKnown RBP7.45□□□□□ -1.22
CSMD1-208ENST00000520561 OR3A3P47888 321 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 DSCR9P59020 149 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 IFITM3Q01628 133 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 ASAH1Q13510 395 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
CSMD1-208ENST00000520561 RGS21Q2M5E4 152 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 DEFB113Q30KQ7 82 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 OR52W1Q6IF63 320 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 STEAP1BQ6NZ63 245 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 LYPD2Q6UXB3 125 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 Q6ZS49 121 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 GAPTQ8N292 157 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 H1FXQ92522 213 aaKnown RBP7.45□□□□□ -1.22
CSMD1-208ENST00000520561 SNAPC3Q92966 411 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 NINJ1Q92982 152 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 BPESC1Q9GZL8 116 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 NARFLQ9H6Q4 476 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 Q9N2K0 584 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 OR6C3Q9NZP0 311 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
CSMD1-208ENST00000520561 USP9YO00507 2555 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TRGV10A0A0A0MS01 117 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 hADV38S2A0JD32 116 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TRDCB7Z8K6 153 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 DISC1C4P0D8 188 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-208ENST00000520561 GPR37O15354 613 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 FABP7O15540 132 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 CD74P04233 296 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 CD3DP04234 171 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 IFNA6P05013 189 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 HRH1P35367 487 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 GLIPR1P48060 266 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 NPY4RP50391 375 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 MEF2CQ06413 473 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-208ENST00000520561 CDK10Q15131 360 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 ESCO2Q56NI9 601 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 ZNF880Q6PDB4 577 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 ZNF554Q86TJ5 538 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 FAM185AQ8N0U4 392 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 LRRC75A-AS1Q8N1F1 130 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TPRX1Q8N7U7 411 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 OR4C16Q8NGL9 310 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 ENKURQ8TC29 256 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 RAB39BQ96DA2 213 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 MBD6Q96DN6 1003 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 NCOR1P1Q9H4R4 102 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 PATZ1Q9HBE1 687 aaKnown RBP7.44□□□□□ -1.22
CSMD1-208ENST00000520561 HRASLSQ9HDD0 168 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 RAB9BQ9NP90 201 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 MBNL3Q9NUK0 354 aaKnown RBP7.44□□□□□ -1.22
CSMD1-208ENST00000520561 NECAP2Q9NVZ3 263 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 MCUBQ9NWR8 336 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 CLN8Q9UBY8 286 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 ANXA10Q9UJ72 324 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TBC1D24Q9ULP9 559 aa7.44□□□□□ -1.22
CSMD1-208ENST00000520561 TRBV23-1A0A0A0MS06 115 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 F5H0A9 414 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-208ENST00000520561 M0QYG6 137 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 PLA2G10O15496 165 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 SPINT2O43291 252 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 PTTG1O95997 202 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 PMP2P02689 132 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 AMY2AP04746 511 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 HEXAP06865 529 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 RCC1P18754 421 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-208ENST00000520561 GNB2P62879 340 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 RPL31P62899 125 aaKnown RBP7.43□□□□□ -1.22
CSMD1-208ENST00000520561 HMGN3Q15651 99 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 CLEC12BQ2HXU8 276 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 VAX1Q5SQQ9 334 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 FAAP20Q6NZ36 180 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 ZNF782Q6ZMW2 699 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-208ENST00000520561 Q6ZPA2 131 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 TMEM17Q86X19 198 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 PRR18Q8N4B5 295 aa7.43□□□□□ -1.22
CSMD1-208ENST00000520561 ZNF565Q8N9K5 539 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms