RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 OLIG3Q7RTU3 272 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 PDPNQ86YL7 162 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 ITPRIPQ8IWB1 547 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 STK40Q8N2I9 435 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 RIBC1Q8N443 379 aaPredicted RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 CYB561D1Q8N8Q1 229 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 ZDHHC22Q8N966 263 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 OR2Z1Q8NG97 314 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 OR9A2Q8NGT5 310 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 OR52N1Q8NH53 320 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 UBALD1Q8TB05 177 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 SCGB1C1Q8TD33 95 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 ASB13Q8WXK3 278 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 PPCDCQ96CD2 204 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 MS4A6AQ9H2W1 248 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 TRIM45Q9H8W5 580 aaPredicted RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 SND1-IT1Q9HBX3 110 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 TAS2R5Q9NYW4 299 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 C14orf166Q9Y224 244 aaKnown RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 A0A1W2PP64 1363 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 LOXHD1Q8IVV2 1947 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 MED1Q15648 1581 aaPredicted RBP2.5□□□□□ -2.01
SQLE-204ENST00000520493 GMNCA6NCL1 334 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 METTL15A6NJ78 407 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ACOX3O15254 700 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TGOLN2O43493 480 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ATP5HO75947 161 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 HLA-DQB1P01920 261 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ZNF7P17097 686 aaPredicted RBP2.5□□□□□ -2.01
SQLE-204ENST00000520493 NUDT2P50583 147 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 RAB25P57735 213 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ACTBP60709 375 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ACTG1P63261 375 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 SKP2Q13309 424 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 CST9Q5W186 159 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 NANOGP8Q6NSW7 305 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TNFAIP8L2Q6P589 184 aaPredicted RBP2.5□□□□□ -2.01
SQLE-204ENST00000520493 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 HAVCR2Q8TDQ0 301 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TWIST2Q8WVJ9 160 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 CLDN23Q96B33 292 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TAMM41Q96BW9 452 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 LINC01587Q99440 93 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ANAPC13Q9BS18 74 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TMEM208Q9BTX3 173 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 THTPAQ9BU02 230 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 CCDC94Q9BW85 323 aaPredicted RBP2.5□□□□□ -2.01
SQLE-204ENST00000520493 CDCA4Q9BXL8 241 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 VCXQ9H320 206 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 VSIRQ9H7M9 311 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 TAS2R9Q9NYW1 312 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 GUCA1BQ9UMX6 200 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 POMPQ9Y244 141 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 ATRNO75882 1429 aa2.5□□□□□ -2.01
SQLE-204ENST00000520493 F5H5T6 163 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 DCTN3O75935 186 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 RPP14O95059 124 aaKnown RBP2.49□□□□□ -2.01
SQLE-204ENST00000520493 TYMSP04818 313 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 CALB1P05937 261 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 CTXN2P0C2S0 81 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 ZNF806P0C7X5 589 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 HSPA13P48723 471 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 RAP1GDS1P52306 607 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 CMC4P56277 68 aaPredicted RBP2.49□□□□□ -2.01
SQLE-204ENST00000520493 STX5Q13190 355 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 BTN1A1Q13410 526 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 TTMPQ5BVD1 217 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 SYPL2Q5VXT5 272 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 NXNL2Q5VZ03 156 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 FAM104BQ5XKR9 115 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 FAM71E1Q6IPT2 247 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 XKRXQ6PP77 449 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 CCDC112Q8NEF3 446 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 OR2M3Q8NG83 312 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 OR10G2Q8NGC3 310 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 OR5K1Q8NHB7 308 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 ANKRD7Q92527 254 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 TESCQ96BS2 214 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 OPTNQ96CV9 577 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 DERL3Q96Q80 235 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 STACQ99469 402 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 MS4A8Q9BY19 250 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 FBXL15Q9H469 300 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 ZNF430Q9H8G1 570 aaPredicted RBP2.49□□□□□ -2.01
SQLE-204ENST00000520493 ZNF223Q9UK11 482 aaPredicted RBP2.49□□□□□ -2.01
SQLE-204ENST00000520493 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
SQLE-204ENST00000520493 IGSF9BQ9UPX0 1349 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 ANKRD12Q6UB98 2062 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.48□□□□□ -2.01
SQLE-204ENST00000520493 K7EPK0 472 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 M0QYV0 167 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 TRAPPC3O43617 180 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 OR7C2O60412 319 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 RBBP9O75884 186 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 ADRA2AP08913 450 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 SEC11BP0C7V7 166 aa2.48□□□□□ -2.01
SQLE-204ENST00000520493 LINC00614P0C842 121 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms