RNA–Protein interactions for RNA: ENST00000517910.1

AP003356.1-202, humanhuman

TSL 2 BASIC

Gene AP003356.1, Length 2,770 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-202ENST00000517910 MRGPRX4Q96LA9 322 aa16.83■□□□□ 0.29
AP003356.1-202ENST00000517910 BMFQ96LC9 184 aa16.83■□□□□ 0.29
AP003356.1-202ENST00000517910 C20orf144Q9BQM9 153 aa16.83■□□□□ 0.29
AP003356.1-202ENST00000517910 MRPL13Q9BYD1 178 aaKnown RBP16.83■□□□□ 0.29
AP003356.1-202ENST00000517910 NPIPB13A6NJU9 1138 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 NPIPB4C9JG80 1138 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 F5H5K5 113 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 TNFSF13O75888 250 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 PAX9P55771 341 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 ZNF845Q96IR2 970 aaPredicted RBP16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 AGMATQ9BSE5 352 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 GPR35Q9HC97 309 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 PLA2G3Q9NZ20 509 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 KLHL13Q9P2N7 655 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 VDAC3Q9Y277 283 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 ZFP30Q9Y2G7 519 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 LNP1A1A4G5 178 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 PPYP01298 95 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 IGKV3-11P04433 115 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 UMODP07911 640 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 RAB7AP51149 207 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 RNASE8Q8TDE3 154 aaKnown RBP16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM234Q8WY98 164 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 ABHD14BQ96IU4 210 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM56Q96MV1 263 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM56-RWDD3S4R434 201 aa16.83■□□□□ 0.28
AP003356.1-202ENST00000517910 DHRS3O75911 302 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 GNRHRP30968 328 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 COL5A1-AS1Q5SY13 56 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 NUFIP2Q7Z417 695 aaKnown RBP16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 CALHM1Q8IU99 346 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 NCOA6Q14686 2063 aaPredicted RBP16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 LILRA1O75019 489 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 OR2J2O76002 312 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 PP6455Q8WZ26 134 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 ZNF160Q9HCG1 818 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 FOXJ2Q9P0K8 574 aa16.82■□□□□ 0.28
AP003356.1-202ENST00000517910 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 SHISA8B8ZZ34 492 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 HNRNPA1P09651 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 RBX1P62877 108 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 MEF2BQ02080 365 aaPredicted RBP16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 EIF3IQ13347 325 aaKnown RBP16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 C12orf76Q8N812 135 aaPredicted RBP16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 PLPPR1Q8TBJ4 325 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 RASL10BQ96S79 203 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM150CB9EJG8 249 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 TYMSP04818 313 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 MDH2P40926 338 aaKnown RBP16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 TESK1Q15569 626 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 OR5T1Q8NG75 326 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 B3GAT1Q9P2W7 334 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 TRAPPC1Q9Y5R8 145 aa16.81■□□□□ 0.28
AP003356.1-202ENST00000517910 CNTRLQ7Z7A1 2325 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 GCH1P30793 250 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 CHRNB4P30926 498 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 GRB2P62993 217 aaKnown RBP16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 PDCD1Q15116 288 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 ZNF542PQ5EBM4 170 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 PARLQ9H300 379 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 PLK3Q9H4B4 646 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 GALR2O43603 387 aaPredicted RBP16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 IGHG1P01857 330 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 OPN1LWP04000 364 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 CELA2BP08218 269 aaPredicted RBP16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 FOSL2P15408 326 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 NPBWR2P48146 333 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM41BQ5BJD5 291 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 NMSQ5H8A3 153 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM31Q5JXX7 168 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 C22orf15Q8WYQ4 148 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 LHX4Q969G2 390 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 ANAPC16Q96DE5 110 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM106BQ9NUM4 274 aa16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 PTRH2Q9Y3E5 179 aaKnown RBP16.8■□□□□ 0.28
AP003356.1-202ENST00000517910 HNRNPA2B1P22626 353 aaKnown RBP16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 PIGYQ3MUY2 71 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 RNF115Q9Y4L5 304 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 ARHGAP21Q5T5U3 1957 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 VDAC1P21796 283 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 TMEM183BQ1AE95 376 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 IMMP2LQ96T52 175 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 WWTR1Q9GZV5 400 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 PCED1AQ9H1Q7 454 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 RNF150Q9ULK6 438 aa16.79■□□□□ 0.28
AP003356.1-202ENST00000517910 LIPT2A6NK58 231 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 IL3RAP26951 378 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 SRP14P37108 136 aaKnown RBP16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 TM4SF4P48230 202 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 RPS18P62269 152 aaKnown RBP16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 RUNX3Q13761 415 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 SSPNQ14714 243 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 KCNIP4Q6PIL6 250 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 MANBALQ9NQG1 85 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 SLC7A10Q9NS82 523 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 A0A0U1RQK1 487 aa16.78■□□□□ 0.28
AP003356.1-202ENST00000517910 ZNF320A2RRD8 509 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms