RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CLEC12AQ5QGZ9 265 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 CCDC121Q6ZUS5 278 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 SCXQ7RTU7 201 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 LRRC6Q86X45 466 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 SYS1Q8N2H4 156 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 OR2M3Q8NG83 312 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 OR4K17Q8NGC6 315 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 OR8K1Q8NGG5 319 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 OR2V1Q8NHB1 315 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.82□□□□□ -2.28
NEDD4-211ENST00000514893 CCL17Q92583 94 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 REEP6Q96HR9 211 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 C20orf166-AS1Q96NR2 134 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 PITX2Q99697 317 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 CLEC2DQ9UHP7 191 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 RBMX2Q9Y388 322 aaKnown RBP0.82□□□□□ -2.28
NEDD4-211ENST00000514893 ZNF337Q9Y3M9 751 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 COL11A1P12107 1806 aaPredicted RBP0.82□□□□□ -2.28
NEDD4-211ENST00000514893 BAHCC1Q9P281 2608 aa0.82□□□□□ -2.28
NEDD4-211ENST00000514893 CACNA1DQ01668 2161 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 NOS1P29475 1434 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 IGHV1-45A0A0A0MS14 117 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TRAV8-2A0A0B4J237 113 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TRGV4A0A0C4DH28 118 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 A0A0J9YYE9 177 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 A0A1B0GXF2 115 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 FAM183AA6NL82 134 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 A8MWP6 167 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 E7EWF7 191 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 FNDC10F2Z333 226 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 RNASEK-C17orf49H0YIS7 233 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 NDUFS8O00217 210 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 SULT1C2O00338 296 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 UBDO15205 165 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 SLC25A20O43772 301 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 CA2P00918 260 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TRBC1P01850 177 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 HLA-AP01891 365 aaKnown RBP0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TPM1P09493 284 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 BGNP21810 368 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 COILP38432 576 aaPredicted RBP0.81□□□□□ -2.28
NEDD4-211ENST00000514893 ACTR1BP42025 376 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 GCLMP48507 274 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TTPAP49638 278 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 PSG4Q00888 419 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 STX3Q13277 289 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 CASP8Q14790 479 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 NKAIN1Q4KMZ8 207 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 ACSBG2Q5FVE4 666 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 GLYATQ6IB77 296 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 DGAT2L6Q6ZPD8 337 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 TPGS1Q6ZTW0 290 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 AHSA2Q719I0 299 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 RBM45Q8IUH3 476 aaKnown RBP0.81□□□□□ -2.28
NEDD4-211ENST00000514893 LGALS14Q8TCE9 139 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 RAD51AP1Q96B01 352 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 DDIT4LQ96D03 193 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 MFSD1Q9H3U5 465 aa0.81□□□□□ -2.28
NEDD4-211ENST00000514893 NXT1Q9UKK6 140 aaKnown RBP0.81□□□□□ -2.28
NEDD4-211ENST00000514893 DYSFO75923 2080 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 PRR14LQ5THK1 2151 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 DNMT1P26358 1616 aaKnown RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 GSTTP1A0A1W2PQM5 241 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 IGSF23A1L1A6 192 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 C9J4A7 227 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 PSMD11O00231 422 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 SLC31A1O15431 190 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 FGF16O43320 207 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 PDCD6O75340 191 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 LDOC1O95751 146 aaPredicted RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 OPN1SWP03999 348 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 OR4A8P0C604 315 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 AKR1C4P17516 323 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 CNTFRP26992 372 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 TSPOP30536 169 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 PPP1CCP36873 323 aaKnown RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 CDK9P50750 372 aaKnown RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 ZNF140P52738 457 aaPredicted RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 AQP5P55064 265 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 MP68P56378 58 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 OR2B6P58173 313 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 GABARAPL2P60520 117 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 TSPAN5P62079 268 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 BSPH1Q075Z2 132 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 FOXF1Q12946 379 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 FLOT2Q14254 428 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 TMEM176BQ3YBM2 270 aaPredicted RBP0.8□□□□□ -2.28
NEDD4-211ENST00000514893 ZCWPW2Q504Y3 356 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 C10orf91Q5T1B1 145 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 TMEM215Q68D42 235 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 CLEC20AQ6ZU45 233 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 SSX7Q7RTT5 188 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 FAM19A3Q7Z5A8 133 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 FAM19A1Q7Z5A9 133 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 RPRMLQ8N4K4 120 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 C3orf22Q8N5N4 141 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 CDRT4Q8N9R6 151 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 Q8NAQ8 132 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 KCTD4Q8WVF5 259 aa0.8□□□□□ -2.28
NEDD4-211ENST00000514893 OR5P2Q8WZ92 322 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms