RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MYEOVQ96EZ4 313 aa5.1□□□□□ -1.59
USP38-203ENST00000511739 GMPPAQ96IJ6 420 aaPredicted RBP5.1□□□□□ -1.59
USP38-203ENST00000511739 ARHGAP5-AS1Q96IT6 56 aa5.1□□□□□ -1.59
USP38-203ENST00000511739 NAA50Q9GZZ1 169 aaKnown RBP5.1□□□□□ -1.59
USP38-203ENST00000511739 WDR90Q96KV7 1748 aa5.1□□□□□ -1.59
USP38-203ENST00000511739 ZNF236Q9UL36 1845 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TMSB15BA0A087X1C1 80 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 IGHV3-21A0A0B4J1V1 117 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 MAP1LC3B2A6NCE7 125 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 FFAR1O14842 300 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 GAPDHP04406 335 aaKnown RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 SPINK2P20155 84 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 C10orf113Q5VZT2 155 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 C16orf82Q7Z2V1 217 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 MRGPRGQ86SM5 289 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 MAP1LC3BQ9GZQ8 125 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 SLC17A2O00624 439 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 REG1BP48304 166 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 SSBP1Q04837 148 aaKnown RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 FAM53AQ6NSI3 398 aaPredicted RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 UNQ5815/PRO19632Q6UWF5 114 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 ZNF429Q86V71 674 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TMEM229BQ8NBD8 167 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 OR4A5Q8NH83 315 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 C2CD4CQ8TF44 421 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 NXF2Q9GZY0 626 aaKnown RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 MMP25Q9NPA2 562 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 A0A1B0GU03 582 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TO15178 435 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 FCARP24071 287 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 MAS1LP35410 378 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 NUTF2P61970 127 aaKnown RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 PSG5Q15238 335 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 INPP5JQ15735 1006 aaPredicted RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 WDR25Q64LD2 544 aaPredicted RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 TOMM20LQ6UXN7 152 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 ZNF66Q6ZN08 573 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 C6orf201Q7Z4U5 140 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 PPP1R1CQ8WVI7 109 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TMEM37Q8WXS4 190 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 NTNG2Q96CW9 530 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TEX37Q96LM6 180 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 VSTM2LQ96N03 204 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 GUCD1Q96NT3 240 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 RASL10BQ96S79 203 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 SF3B5Q9BWJ5 86 aaKnown RBP5.09□□□□□ -1.59
USP38-203ENST00000511739 SLC25A19Q9HC21 320 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 MMP24Q9Y5R2 645 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 DOCK3Q8IZD9 2030 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 OR2A25A4D2G3 310 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 CORTO00230 105 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 RGS13O14921 159 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 PPP1R17O96001 155 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 INHBBP09529 407 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 ZNF735P0CB33 412 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 CD96P40200 585 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 KLRB1Q12918 225 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TMEM241Q24JQ0 296 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 FAM78BQ5VT40 261 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 WDR73Q6P4I2 378 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 TCTEX1D1Q8N7M0 179 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 CELF2-AS1Q8N7Q2 184 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 ZNF502Q8TBZ5 544 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 UQCC2Q9BRT2 126 aa5.09□□□□□ -1.59
USP38-203ENST00000511739 A0A0A6YYD5 115 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 ZNF737O75373 536 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 DEDDO75618 318 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 ETHE1O95571 254 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 GP1BAP07359 652 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 TIAL1Q01085 375 aaKnown RBP eCLIP5.09□□□□□ -1.6
USP38-203ENST00000511739 ISXQ2M1V0 245 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 HIKESHIQ53FT3 197 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 WDR74Q6RFH5 385 aaPredicted RBP5.09□□□□□ -1.6
USP38-203ENST00000511739 OR1L6Q8NGR2 347 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 LILRB4Q8NHJ6 448 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 ADAMTS17Q8TE56 1095 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 OIT3Q8WWZ8 545 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 ORAI1Q96D31 301 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 LOXL4Q96JB6 756 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 GPR27Q9NS67 375 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 SERGEFQ9UGK8 458 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 BOLA1Q9Y3E2 137 aa5.09□□□□□ -1.6
USP38-203ENST00000511739 BRCA1P38398 1863 aaKnown RBP5.09□□□□□ -1.6
USP38-203ENST00000511739 TCRBV5S2A0A599 114 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 COX6CP09669 75 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 HIST1H1DP16402 221 aaKnown RBP5.08□□□□□ -1.6
USP38-203ENST00000511739 GP2P55259 537 aaKnown RBP5.08□□□□□ -1.6
USP38-203ENST00000511739 DCAF12L2Q5VW00 463 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 NUBPLQ8TB37 319 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 ZNF714Q96N38 554 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 JMJD8Q96S16 334 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 NTN4Q9HB63 628 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 MRPS16Q9Y3D3 137 aaKnown RBP5.08□□□□□ -1.6
USP38-203ENST00000511739 TMEM56-RWDD3S4R434 201 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 hCG_38984A0A1B0GV85 526 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 NKX2-2O95096 273 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 HIST1H1BP16401 226 aaKnown RBP5.08□□□□□ -1.6
USP38-203ENST00000511739 COL9A1P20849 921 aa5.08□□□□□ -1.6
USP38-203ENST00000511739 SULT1A2P50226 295 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms