RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SEMA4FO95754 770 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 ONECUT2O95948 504 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 OPRM1P35372 400 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 CAPZBP47756 277 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 OR3A1P47881 315 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 HNRNPKP61978 463 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCLT1-208ENST00000506368 HIST1H3AP68431 136 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 RUNX1Q01196 453 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 BSXQ3C1V8 233 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 KCNIP4Q6PIL6 250 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 Q6ZSR6 202 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 C16orf82Q7Z2V1 217 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 THNSL2Q86YJ6 484 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 GBGT1Q8N5D6 347 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 SIGLEC12Q96PQ1 595 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 DNAH14Q0VDD8 3507 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 ARHGEF17Q96PE2 2063 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-208ENST00000506368 LNP1A1A4G5 178 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 HOXB2P14652 356 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 FKBP2P26885 142 aaKnown RBP13.73□□□□□ -0.21
SCLT1-208ENST00000506368 RRADP55042 308 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 MRPS21P82921 87 aaKnown RBP13.73□□□□□ -0.21
SCLT1-208ENST00000506368 LHFPL2Q6ZUX7 228 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 ODF3L1Q8IXM7 274 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 METTL27Q8N6F8 245 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-208ENST00000506368 NPRL2Q8WTW4 380 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 TRAF3IP2O43734 574 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-208ENST00000506368 CST7O76096 145 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 FAHP16930 419 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 AADACP22760 399 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 OTX1P32242 354 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-208ENST00000506368 CPEB2Q7Z5Q1 589 aaKnown RBP13.72□□□□□ -0.21
SCLT1-208ENST00000506368 OR11L1Q8NGX0 322 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 PIGTQ969N2 578 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 LIN37Q96GY3 246 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-208ENST00000506368 OXGR1Q96P68 337 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 OR6C3Q9NZP0 311 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 MMP17Q9ULZ9 603 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
SCLT1-208ENST00000506368 MAP1LC3B2A6NCE7 125 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TOX3O15405 576 aaPredicted RBP13.71□□□□□ -0.21
SCLT1-208ENST00000506368 ADAM20O43506 726 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 VENTXO95231 258 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
SCLT1-208ENST00000506368 OR5D13Q8NGL4 314 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 MAP1LC3BQ9GZQ8 125 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF665Q9H7R5 613 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 LAMA1P25391 3075 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 OR4A8P0C604 315 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 MSR1P21757 451 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TNFSF10P50591 281 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 MALLQ13021 153 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 ADIRFQ15847 76 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM41BQ5BJD5 291 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TBC1D26Q86UD7 250 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM217Q8N7C4 229 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 OR10J5Q8NHC4 309 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 NAGKQ9UJ70 344 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.21
SCLT1-208ENST00000506368 WDR87Q6ZQQ6 2873 aa13.71□□□□□ -0.22
SCLT1-208ENST00000506368 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 FAM221AA4D161 298 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 METTL12A8MUP2 240 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 CHST1O43916 411 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 PDCD6O75340 191 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 HLA-HP01893 362 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 PCP4P48539 62 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 BLKP51451 505 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF154Q13106 437 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 P2RY6Q15077 328 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 CXorf66Q5JRM2 361 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 TEX38Q6PEX7 206 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 FOXL2NBQ6ZUU3 175 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 OSR2Q8N2R0 312 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 SUMF1Q8NBK3 374 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 SPTSSAQ969W0 71 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 PLK3Q9H4B4 646 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 MRPS18CQ9Y3D5 142 aaKnown RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 KMT2EQ8IZD2 1858 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 S100GP29377 79 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 CDAP32320 146 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 MDH2P40926 338 aaKnown RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 UBE2NP61088 152 aaKnown RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 MEF2BQ02080 365 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 MYBPHQ13203 477 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF774Q6NX45 483 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 SYT13Q7L8C5 426 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms