RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 KRTCAP3Q53RY4 240 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 FAM74A1Q5RGS3 127 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 FIP1L1Q6UN15 594 aaKnown RBP13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 SPERTQ8NA61 448 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 OR10J5Q8NHC4 309 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 TP53RKQ96S44 253 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 CXXC4Q9H2H0 198 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 TINAGQ9UJW2 476 aa13.09□□□□□ -0.31
SNCAIP-207ENST00000504884 RIF1Q5UIP0 2472 aaKnown RBP13.08□□□□□ -0.31
SNCAIP-207ENST00000504884 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 SLC33A1O00400 549 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 RCC1P18754 421 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 GCH1P30793 250 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 CMTM1Q8IZ96 169 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 GAPTQ8N292 157 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 ZC4H2Q9NQZ6 224 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 UBE2J1Q9Y385 318 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 GTF3C1Q12789 2109 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 A8MXK9 166 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 K7EPK0 472 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 SIRPB1O00241 398 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TIMM8AO60220 97 aaPredicted RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 FGF2P09038 288 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TIMP3P35625 211 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 C1orf185Q5T7R7 199 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 ZNF497Q6ZNH5 498 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 FAM71E2Q8N5Q1 922 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 KIRREL1Q96J84 757 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TMEM56Q96MV1 263 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 CABLES2Q9BTV7 478 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 GLS2Q9UI32 602 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 TMEM56-RWDD3S4R434 201 aa13.08□□□□□ -0.32
SNCAIP-207ENST00000504884 IGHV2OR16-5A0A0B4J2B6 119 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 E5RGE8 158 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 MKRN2OSH3BPM6 223 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 MLNRO43193 412 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 MBPP02686 304 aaPredicted RBP13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 S100GP29377 79 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 FABP6P51161 128 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 TMEM268Q5VZI3 342 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 ZNF324BQ6AW86 544 aaPredicted RBP13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 ZNF695Q8IW36 515 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 LHFPL5Q8TAF8 219 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 CCL28Q9NRJ3 127 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 FAM215AQ9Y5M1 114 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 ZFHX4Q86UP3 3567 aa13.07□□□□□ -0.32
SNCAIP-207ENST00000504884 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 KRBOX1C9JBD0 128 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 NPIPB11E5RHQ5 1161 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 K7EM74 188 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 HOXD4P09016 255 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 MEX3BQ6ZN04 569 aaKnown RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 SLC35G3Q8N808 338 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 BVESQ8NE79 360 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 BARX1Q9HBU1 254 aaPredicted RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 TRAPPC2LQ9UL33 140 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 DUXBA0A1W2PPF3 345 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 HSD17B6O14756 317 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 ST8SIA3O43173 380 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 CDS2O95674 445 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 ZP3P21754 424 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 LMO1P25800 156 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 MZT1Q08AG7 82 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 RNF141Q8WVD5 230 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 TLNRD1Q9H1K6 362 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 TAAR3PQ9P1P4 343 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 WIPI2Q9Y4P8 454 aa13.06□□□□□ -0.32
SNCAIP-207ENST00000504884 INTS1Q8N201 2190 aaKnown RBP13.05□□□□□ -0.32
SNCAIP-207ENST00000504884 PIGBOS1A0A0B4J2F0 54 aa13.05□□□□□ -0.32
SNCAIP-207ENST00000504884 IGHV3-64DA0A0J9YX35 117 aa13.05□□□□□ -0.32
SNCAIP-207ENST00000504884 FGF16O43320 207 aa13.05□□□□□ -0.32
SNCAIP-207ENST00000504884 HAND1O96004 215 aa13.05□□□□□ -0.32
SNCAIP-207ENST00000504884 ZNF474Q6S9Z5 364 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms