RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 MZT2BQ6NZ67 158 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FIP1L1Q6UN15 594 aaKnown RBP8.65□□□□□ -1.02
TPM3-217ENST00000504663 BTN2A1Q7KYR7 527 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 LDLRAD3Q86YD5 345 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 OR51S1Q8NGJ8 323 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 OR4K15Q8NH41 348 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 HPS1Q92902 700 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 ST6GALNAC5Q9BVH7 336 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FXYD6Q9H0Q3 95 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 DPAGT1Q9H3H5 408 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 DECR2Q9NUI1 292 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FAIMQ9NVQ4 179 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 EDARQ9UNE0 448 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 FLVCR2Q9UPI3 526 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
TPM3-217ENST00000504663 PPIAL4EA0A075B759 164 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 FAM240BA0A1B0GVZ2 78 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 PPIAL4DF5H284 164 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 H3BUI4 141 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 K7N7A8 449 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 NDUFB6O95139 128 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 GYPAP02724 150 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 AMY2AP04746 511 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 PPIAL4FP0DN26 164 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 KCNJ3P48549 501 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 HLA-DRB3P79483 266 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 RBM39Q14498 530 aaKnown RBP8.64□□□□□ -1.03
TPM3-217ENST00000504663 MEF2DQ14814 521 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 CDK10Q15131 360 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 ACTBL2Q562R1 376 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 ZNRF1Q8ND25 227 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 OR5AP2Q8NGF4 316 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 ENKURQ8TC29 256 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 SNX22Q96L94 193 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 CCL13Q99616 98 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 VRK1Q99986 396 aaPredicted RBP8.64□□□□□ -1.03
TPM3-217ENST00000504663 DCTN5Q9BTE1 182 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 C20orf85Q9H1P6 137 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 DNAJB11Q9UBS4 358 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 KIF25Q9UIL4 384 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 FBXO9Q9UK97 447 aaPredicted RBP8.64□□□□□ -1.03
TPM3-217ENST00000504663 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 NUBP2Q9Y5Y2 271 aa8.64□□□□□ -1.03
TPM3-217ENST00000504663 TMEM30CPA0ZSE6 113 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 C7orf66A4D0T2 115 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 OR5H14A6NHG9 310 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 SDCBPO00560 298 aaPredicted RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 TUSC2O75896 110 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 TK1P04183 234 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 SCTP09683 121 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 CGB3P0DN86 165 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 CGB7P0DN87 165 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 VSIG10L2P0DP72 767 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 COL8A1P27658 744 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 GLIPR1P48060 266 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 TAS2R46P59540 309 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 AESQ08117 197 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 CR1LQ2VPA4 569 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 IGSF11Q5DX21 431 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 RNASE10Q5GAN6 216 aaKnown RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 SP5Q6BEB4 398 aaPredicted RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 PEG10Q86TG7 708 aaKnown RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 CADM3Q8N126 398 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 ZNF561Q8N587 486 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 TPRX1Q8N7U7 411 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 OR13A1Q8NGR1 328 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 NEK7Q8TDX7 302 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 NEU4Q8WWR8 484 aaPredicted RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 CCL17Q92583 94 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 TMEM246Q9BRR3 403 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 RIMS4Q9H426 269 aaPredicted RBP8.63□□□□□ -1.03
TPM3-217ENST00000504663 ZNF286AQ9HBT8 521 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 NUDT15Q9NV35 164 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 MCUBQ9NWR8 336 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 VSIG4Q9Y279 399 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
TPM3-217ENST00000504663 AKAP6Q13023 2319 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 TRAV6A0A075B6T7 132 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 LRRC30A6NM36 301 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 CENPXA8MT69 81 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 NPIPB11E5RHQ5 1161 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 MGST3O14880 152 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 FABP7O15540 132 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 IRF2P14316 349 aa8.62□□□□□ -1.03
TPM3-217ENST00000504663 FAUP35544 74 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms