RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 DYRK2Q92630 601 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 TIMD4Q96H15 378 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 LURAP1Q96LR2 239 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 CABLES2Q9BTV7 478 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 OR6C3Q9NZP0 311 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 KAAG1Q9UBP8 84 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 LPAR3Q9UBY5 353 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 ITPR1Q14643 2758 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 ROS1P08922 2347 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 TRAV6A0A075B6T7 132 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 C7orf66A4D0T2 115 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 SNRPGP15A8MWD9 76 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 NPIPB11E5RHQ5 1161 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 C3orf80F5H4A9 247 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ARPC1BO15143 372 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 CD8AP01732 235 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 HPXP02790 462 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 RLN1P04808 185 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 SOD3P08294 240 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 GSTT2P0CG29 244 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 COX6B1P14854 86 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 S100GP29377 79 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 CD80P33681 288 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 UCP3P55916 312 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 HERV-K104P61576 105 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ATXN7L3Q14CW9 347 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM30BQ3MIR4 351 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 SPRNQ5BIV9 151 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF788Q6ZQV5 615 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 CADM3Q8N126 398 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 OR5T2Q8NGG2 359 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 OR13C8Q8NGS7 320 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 PLPPR1Q8TBJ4 325 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 MAFIPQ8WZ33 124 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 GALMQ96C23 342 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF486Q96H40 463 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF2Q9BSG1 426 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 SHARPINQ9H0F6 387 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 UBTD1Q9HAC8 227 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 LAMP3Q9UQV4 416 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 C14orf166Q9Y224 244 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 ABCA4P78363 2273 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 IGSF10Q6WRI0 2623 aa6.8□□□□□ -1.32
TOPBP1-202ENST00000503338 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 IGHV3OR15-7A0A075B7D8 119 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 IGKV1D-8A0A087WSZ0 117 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 MEIKINA0A087WXM9 373 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 PIGBOS1A0A0B4J2F0 54 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 ODAMA1E959 279 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 HMX3A6NHT5 357 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 PYCARD-AS1I3L0S3 204 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 J3QKU1 62 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 SPINT2O43291 252 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 CREBL2O60519 120 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 GYPAP02724 150 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 PGAM2P15259 253 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 P2RX3P56373 397 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM33P57088 247 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 MEF2CQ06413 473 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 HMGN3Q15651 99 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 LRRC10Q5BKY1 277 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF660Q6AZW8 331 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 GLDNQ6ZMI3 551 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC25A42Q86VD7 318 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 GLCCI1Q86VQ1 547 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC38A6Q8IZM9 456 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM185AQ8N0U4 392 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM185AQ8NFB2 350 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 OR10J5Q8NHC4 309 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 RAB1CQ92928 201 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 DACT3Q96B18 629 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 MOB3AQ96BX8 217 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 C14orf79Q96F83 325 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 COQ2Q96H96 371 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 GAFA1Q96PS6 74 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 CLEC4MQ9H2X3 399 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 TAF9BQ9HBM6 251 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 KIF25Q9UIL4 384 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 GPR132Q9UNW8 380 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 MAB21L2Q9Y586 359 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 ALG5Q9Y673 324 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 ARFGEF3Q5TH69 2177 aa6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 CHD3Q12873 2000 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-202ENST00000503338 DYSFO75923 2080 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TRGV10A0A0A0MS01 117 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TRBV6-7A0A0A0MS04 114 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 hADV38S2A0JD32 116 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CLEC18AA5D8T8 446 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM172BPA6NC97 362 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 SDCBPO00560 298 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 BET1O15155 118 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 HSPA12AO43301 675 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms