RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	IFT46	Q9NQC8	304 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	CTSZ	Q9UBR2	303 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	FASN	P49327	2511 aa	Known RBP	10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	TMEM30CP	A0ZSE6	113 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	NKX6-3	A6NJ46	265 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394		F5H0A9	414 aa	Predicted RBP	10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	FCER2	P06734	321 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF735	P0CB33	412 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	AKAIN1	P0CW23	69 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	TBP	P20226	339 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	DEFA1	P59665	94 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	DEFA3	P59666	94 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	OXA1L	Q15070	435 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	GRK1	Q15835	563 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	CR1L	Q2VPA4	569 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	VAX1	Q5SQQ9	334 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	HIST2H2BC	Q6DN03	193 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	OR52W1	Q6IF63	320 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	STEAP1B	Q6NZ63	245 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	MOB1B	Q7L9L4	216 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	SLC36A1	Q7Z2H8	476 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	MUC20	Q8N307	709 aa	Predicted RBP	10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	POC5	Q8NA72	575 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	OR4D10	Q8NGI6	311 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	OR5D13	Q8NGL4	314 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	OR4C16	Q8NGL9	310 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	MED30	Q96HR3	178 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	ST6GALNAC5	Q9BVH7	336 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	GSX2	Q9BZM3	304 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	KIF25	Q9UIL4	384 aa		10.09	□□□□□ -0.79
MATR3-231	ENST00000502394	LINC00854	A0A1B0GVQ3	168 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	NAP1L6	A6NFF2	107 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	CEACAM18	A8MTB9	384 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ZNF736	B4DX44	427 aa	Predicted RBP	10.08	□□□□□ -0.8
MATR3-231	ENST00000502394		H7C1Q1	480 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ADAM20	O43506	726 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	SSX4	O60224	188 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	PTTG1	O95997	202 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	HLA-DMA	P28067	261 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	GLIPR1	P48060	266 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	INPP1	P49441	399 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	P2RX3	P56373	397 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	MRPS15	P82914	257 aa	Known RBP	10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	AES	Q08117	197 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	HMGN3	Q15651	99 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ACTBL2	Q562R1	376 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	AVPI1	Q5T686	147 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ZNF841	Q6ZN19	808 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	GDPD3	Q7L5L3	318 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	PEG10	Q86TG7	708 aa	Known RBP	10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	FGFRL1	Q8N441	504 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ZNF525	Q8N782	197 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	OR4K15	Q8NH41	348 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	CHPT1	Q8WUD6	406 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	RAB1C	Q92928	201 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	COX4I2	Q96KJ9	171 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ZNF286A	Q9HBT8	521 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	BARX1	Q9HBU1	254 aa	Predicted RBP	10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ANXA10	Q9UJ72	324 aa		10.08	□□□□□ -0.8
MATR3-231	ENST00000502394	ODAM	A1E959	279 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394		M0QYG6	137 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TMPRSS2	O15393	492 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	PPIH	O43447	177 aa	Known RBP	10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	RAB3D	O95716	219 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	CGB3	P0DN86	165 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	CGB7	P0DN87	165 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	RCC1	P18754	421 aa	Predicted RBP	10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	SLC6A1	P30531	599 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	HRH1	P35367	487 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	GPR6	P46095	362 aa	Predicted RBP	10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TAS2R46	P59540	309 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	HLA-DRB3	P79483	266 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	HERPUD1	Q15011	391 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	RGS21	Q2M5E4	152 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	PLA1A	Q53H76	456 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	KRBOX4	Q5JUW0	171 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	FAAP20	Q6NZ36	180 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TCF23	Q7RTU1	214 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	OVCH2	Q7RTZ1	564 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	C5orf24	Q7Z6I8	188 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	ZNF554	Q86TJ5	538 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TPRX1	Q8N7U7	411 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	DUSP18	Q8NEJ0	188 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TMEM185A	Q8NFB2	350 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	OR5AP2	Q8NGF4	316 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TIMD4	Q96H15	378 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	CABLES2	Q9BTV7	478 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	SLC2A8	Q9NY64	477 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	MGAT4A	Q9UM21	535 aa		10.07	□□□□□ -0.8
MATR3-231	ENST00000502394	TRAV39	A0A0B4J263	110 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	IGKV1-6	A0A0C4DH72	117 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	KIR2DS1	A0A191URI9	304 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	VWC2L	B2RUY7	222 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	TRDC	B7Z8K6	153 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	C15orf65	H3BRN8	121 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	FABP7	O15540	132 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	WNT2	P09544	360 aa		10.06	□□□□□ -0.8
MATR3-231	ENST00000502394	GSTT2	P0CG29	244 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms