RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 HSPE1-MOB4S4R3N1 261 aa13.64□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 CASQ2O14958 399 aaPredicted RBP13.63□□□□□ -0.23
SMC4-226ENST00000497311 HTR3BO95264 441 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 CLIC3O95833 236 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 CD2P06729 351 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 SNRNP70P08621 437 aaKnown RBP13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 KCNJ3P48549 501 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 GTF2A1P52655 376 aaPredicted RBP13.63□□□□□ -0.23
SMC4-226ENST00000497311 PAX5Q02548 391 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 LTC4SQ16873 150 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 PIGYQ3MUY2 71 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 OGFRL1Q5TC84 451 aaPredicted RBP13.63□□□□□ -0.23
SMC4-226ENST00000497311 RSBN1Q5VWQ0 802 aaPredicted RBP13.63□□□□□ -0.23
SMC4-226ENST00000497311 C10orf99Q6UWK7 81 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 OSR2Q8N2R0 312 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 Q8NFD4 153 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 RFESDQ8TAC1 157 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 PLPPR1Q8TBJ4 325 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 MRGPRDQ8TDS7 321 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 GPR148Q8TDV2 347 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 APH1BQ8WW43 257 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
SMC4-226ENST00000497311 PSMB11A5LHX3 300 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 NPIPB11E5RHQ5 1161 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 RAB7AP51149 207 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 MADCAM1Q13477 382 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 HES1Q14469 280 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 TTC23Q5W5X9 447 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 RPL22L1Q6P5R6 122 aaKnown RBP13.62□□□□□ -0.23
SMC4-226ENST00000497311 ASCL4Q6XD76 172 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 DRAM1Q8N682 238 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 OR10A7Q8NGE5 316 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 OR56B4Q8NH76 319 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 CYGBQ8WWM9 190 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 RGP1Q92546 391 aaPredicted RBP13.62□□□□□ -0.23
SMC4-226ENST00000497311 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
SMC4-226ENST00000497311 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
SMC4-226ENST00000497311 WBP4O75554 376 aaKnown RBP13.61□□□□□ -0.23
SMC4-226ENST00000497311 DUS4LO95620 317 aaKnown RBP13.61□□□□□ -0.23
SMC4-226ENST00000497311 MPIG6BO95866 241 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 LIMS3P0CW19 117 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 LIMS4P0CW20 117 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 TMEM11P17152 192 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 GNG10P50151 68 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 ADARB1P78563 741 aaKnown RBP13.61□□□□□ -0.23
SMC4-226ENST00000497311 CCDC58Q4VC31 144 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 SLC16A12Q6ZSM3 486 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 OR8H3Q8N146 312 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 DHRSXQ8N5I4 330 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 SUMF2Q8NBJ7 301 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 OR10X1Q8NGY0 326 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 TMEM106AQ96A25 262 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 DPCDQ9BVM2 203 aaPredicted RBP13.61□□□□□ -0.23
SMC4-226ENST00000497311 METTL9Q9H1A3 318 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 FGF20Q9NP95 211 aaPredicted RBP13.61□□□□□ -0.23
SMC4-226ENST00000497311 ING4Q9UNL4 249 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 ZNF281Q9Y2X9 895 aa13.61□□□□□ -0.23
SMC4-226ENST00000497311 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 CDRT1O95170 752 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
SMC4-226ENST00000497311 SSTR5P35346 364 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 ZNF93P35789 620 aaPredicted RBP13.6□□□□□ -0.23
SMC4-226ENST00000497311 PPP3R1P63098 170 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 SMN1Q16637 294 aaKnown RBP13.6□□□□□ -0.23
SMC4-226ENST00000497311 TMPRSS11AQ6ZMR5 421 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 S100A13Q99584 98 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 TMEM138Q9NPI0 162 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
SMC4-226ENST00000497311 TRAV39A0A0B4J263 110 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 ERICH4A6NGS2 130 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 FGF16O43320 207 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
SMC4-226ENST00000497311 GZMHP20718 246 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 DCKP27707 260 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 ETV1P50549 477 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 HNF4GQ14541 408 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 NHLRC3Q5JS37 347 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 XAF1Q6GPH4 301 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 ZNF329Q86UD4 541 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 C5orf56Q8N8D9 126 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 OR51D1Q8NGF3 324 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 OR52N1Q8NH53 320 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 CHPT1Q8WUD6 406 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 IFT22Q9H7X7 185 aa13.59□□□□□ -0.23
SMC4-226ENST00000497311 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
SMC4-226ENST00000497311 ZNF581Q9P0T4 197 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms