RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 KIF25Q9UIL4 384 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 PURGQ9UJV8 347 aaKnown RBP5.91□□□□□ -1.46
USP39-219ENST00000496047 PCDHB10Q9UN67 800 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 MYO9AB2RTY4 2548 aa5.91□□□□□ -1.46
USP39-219ENST00000496047 DYSFO75923 2080 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 ABCA12Q86UK0 2595 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 hCG_1807616A0A1W2PRN6 198 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 DBX1A6NMT0 343 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 VSTM5A8MXK1 200 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 M0R1B8 84 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 GPR31O00270 319 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 SYNGR1O43759 233 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 MPC2O95563 127 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 PPYP01298 95 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 IGLV1-44P01699 117 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 CELA3BP08861 270 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 CECR9P0C854 216 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 TPT1P13693 172 aaKnown RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 HOXB4P17483 251 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 CXCL2P19875 107 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 TNFSF4P23510 183 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 CASP6P55212 293 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 S100A10P60903 97 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RND3P61587 244 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 SMIM21Q3B7S5 101 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 Q5BKY6 102 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 MBNL2Q5VZF2 373 aaKnown RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 EIF5AL1Q6IS14 154 aaKnown RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 PRSS54Q6PEW0 395 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RTN4RL2Q86UN3 420 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 SLC7A5P1Q8MH63 180 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 KCNRGQ8N5I3 272 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 ZNF610Q8N9Z0 462 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 POC1AQ8NBT0 407 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 SCCPDHQ8NBX0 429 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 OR10J5Q8NHC4 309 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 KLF14Q8TD94 323 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 RTN4IP1Q8WWV3 396 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 TMEM230Q96A57 120 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 MRGPRFQ96AM1 343 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 STARD4Q96DR4 205 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 PHYHIPLQ96FC7 376 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 GALNT14Q96FL9 552 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RTBDNQ9BSG5 229 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 ZNF471Q9BX82 626 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 WDR13Q9H1Z4 485 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 ZNF71Q9NQZ8 489 aaPredicted RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 DECR2Q9NUI1 292 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RASL12Q9NYN1 266 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RDH8Q9NYR8 311 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 MTCH1Q9NZJ7 389 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 TAAR3PQ9P1P4 343 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 MBD2Q9UBB5 411 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 DNAJB11Q9UBS4 358 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 TRAPPC2LQ9UL33 140 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 TNFSF18Q9UNG2 199 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 TP53TG5Q9Y2B4 290 aa5.9□□□□□ -1.46
USP39-219ENST00000496047 RBM7Q9Y580 266 aaKnown RBP5.9□□□□□ -1.46
USP39-219ENST00000496047 HCFC1P51610 2035 aa5.9□□□□□ -1.47
USP39-219ENST00000496047 DOPEY1Q5JWR5 2465 aa5.9□□□□□ -1.47
USP39-219ENST00000496047 TENM4Q6N022 2769 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 IGHV2OR16-5A0A0B4J2B6 119 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 TMEM30CPA0ZSE6 113 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 FAM221AA4D161 298 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 LINC00862A6NCI5 91 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 RNF212BA8MTL3 300 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 G3V3Q6 166 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 HSPB6O14558 160 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 HS3ST1O14792 307 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 TAAR5O14804 337 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 BET1O15155 118 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 PHF1O43189 567 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 HSPA12AO43301 675 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 TNFSF13O75888 250 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 AGFG2O95081 481 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 NAPSAO96009 420 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 GRPP07492 148 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 HOXB5P09067 269 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 PGA5P0DJD9 388 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ATF4P18848 351 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 PI3P19957 117 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 GLRA1P23415 457 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 DUSP1P28562 367 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 KLF3P57682 345 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 NAAAQ02083 359 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ID3Q02535 119 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SRSF1Q07955 248 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP39-219ENST00000496047 FOXF2Q12947 444 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ZNF154Q13106 437 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ATXN7L3Q14CW9 347 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 C2orf68Q2NKX9 166 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 IAH1Q2TAA2 248 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 C6orf183Q5T699 404 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 GFRALQ6UXV0 394 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 REC114Q7Z4M0 266 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 MRGPRGQ86SM5 289 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms