RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	GAL3ST2	Q9H3Q3	398 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	MTFP1	Q9UDX5	166 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-231	ENST00000494973	LINC00312	Q9Y6C7	94 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	POLQ	O75417	2590 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	hCG_1809904	A0A1W2PP81	198 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973		A0A1W2PPE2	198 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973		A0A1W2PR64	198 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973		A0A1W2PRV1	198 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	ENSA	O43768	121 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	ORC5	O43913	435 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	MT-ND4	P03905	459 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	LIPF	P07098	398 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	FCGR3A	P08637	254 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	INHBB	P09529	407 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	FAU	P35544	74 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	TAS2R46	P59540	309 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	RPL31	P62899	125 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	AES	Q08117	197 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	BRICD5	Q6PL45	260 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	HOGA1	Q86XE5	327 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	DTX3	Q8N9I9	347 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	C8orf46	Q8TAG6	207 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	PLPPR1	Q8TBJ4	325 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	MRPL30	Q8TCC3	161 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	H1FX	Q92522	213 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	COQ2	Q96H96	371 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	DCTN5	Q9BTE1	182 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	NARFL	Q9H6Q4	476 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	MBNL3	Q9NUK0	354 aa	Known RBP	11.24	□□□□□ -0.61
APTX-231	ENST00000494973	TAS2R3	Q9NYW6	316 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF581	Q9P0T4	197 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	KIF25	Q9UIL4	384 aa		11.24	□□□□□ -0.61
APTX-231	ENST00000494973	IGHV4-61	A0A0C4DH41	118 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973		A0A1W2PQ09	198 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF729	A6NN14	1252 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-231	ENST00000494973	CTXN2	P0C2S0	81 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	SELL	P14151	372 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	GLP1R	P43220	463 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	TAS2R19	P59542	299 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	LMO4	P61968	165 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	CR1L	Q2VPA4	569 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	OLFML2A	Q68BL7	652 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF880	Q6PDB4	577 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF841	Q6ZN19	808 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	OR10A7	Q8NGE5	316 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	OR52I2	Q8NH67	350 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	SETD6	Q8TBK2	473 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	CORO2A	Q92828	525 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	BORCS5	Q969J3	196 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	THAP7	Q9BT49	309 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-231	ENST00000494973		Q9N2K0	584 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	PALMD	Q9NP74	551 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	ANAPC10	Q9UM13	185 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-231	ENST00000494973	RBMX2	Q9Y388	322 aa	Known RBP	11.23	□□□□□ -0.61
APTX-231	ENST00000494973	TACC2	O95359	2948 aa		11.23	□□□□□ -0.61
APTX-231	ENST00000494973	LOC105371242	A0A075B767	164 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	PPIAL4C	A0A0B4J2A2	164 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973		A0A1B0GW55	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	TRDC	B7Z8K6	153 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	SPINT2	O43291	252 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	SSX5	O60225	188 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	RBP4	P02753	201 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	TFF1	P04155	84 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L2	P0CJ85	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L3	P0CJ86	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L4	P0CJ87	422 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L5	P0CJ88	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L6	P0CJ89	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L7	P0CJ90	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	NAT1	P18440	290 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	RBMX	P38159	391 aa	Known RBP	11.22	□□□□□ -0.61
APTX-231	ENST00000494973	GDNF	P39905	211 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	GLIPR1	P48060	266 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	ARPC4	P59998	168 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	HLA-DRB3	P79483	266 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DGCR2	P98153	550 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-231	ENST00000494973	BTNL3	Q6UXE8	466 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	BTN2A1	Q7KYR7	527 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	FAM185A	Q8N0U4	392 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	BEST4	Q8NFU0	473 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	OR4A4P	Q8NGN8	299 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	OR4K15	Q8NH41	348 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973		Q96MF0	132 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF714	Q96N38	554 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	REG4	Q9BYZ8	158 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DUX4	Q9UBX2	424 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.22	□□□□□ -0.61
APTX-231	ENST00000494973	BAHCC1	Q9P281	2608 aa		11.22	□□□□□ -0.61
APTX-231	ENST00000494973	DOCK11	Q5JSL3	2073 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	CENPX	A8MT69	81 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973		B4DSR2	109 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF736	B4DX44	427 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-231	ENST00000494973	GATA3	P23771	443 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	GZMK	P49863	264 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	GUCA2A	Q02747	115 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	MADCAM1	Q13477	382 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	MEF2D	Q14814	521 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms