RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TRAV39A0A0B4J263 110 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 GEMIN2O14893 280 aaKnown RBP12.51□□□□□ -0.41
LIMS2-216ENST00000494613 CD1AP06126 327 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 CSF1P09603 554 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 GZMHP20718 246 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 BRS3P32247 399 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 KCNJ3P48549 501 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 TAS2R43P59537 309 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 PAX5Q02548 391 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 DOC2BQ14184 412 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 HLA-DRB5Q30154 266 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 CREB3L1Q96BA8 519 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 OR14A2Q96R54 314 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 FKBP14Q9NWM8 211 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 CKLFQ9UBR5 152 aa12.51□□□□□ -0.41
LIMS2-216ENST00000494613 A0A1W2PP11 408 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 MAGEA13PA6NCF6 341 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 J3QR06 171 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 PIN1P1O15428 100 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-216ENST00000494613 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-216ENST00000494613 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 GTF2F2P13984 249 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 SERPINA2P20848 420 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 CEACAM3P40198 252 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 GLP1RP43220 463 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 WNT4P56705 351 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
LIMS2-216ENST00000494613 GPR176Q14439 515 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
LIMS2-216ENST00000494613 C2orf68Q2NKX9 166 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 OR9G1Q8NH87 305 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 PSG11Q9UQ72 335 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 ERGIC3Q9Y282 383 aa12.5□□□□□ -0.41
LIMS2-216ENST00000494613 MAS1P04201 325 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 LTC4SQ16873 150 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 ATAD3CQ5T2N8 411 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 UNQ9370/PRO34162Q6UXP9 181 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 MUL1Q969V5 352 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 MMP28Q9H239 520 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 VCXQ9H320 206 aa12.49□□□□□ -0.41
LIMS2-216ENST00000494613 OOSP1A8MZH6 123 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 MYL12BO14950 172 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 IL1AP01583 271 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 MT-ND4P03905 459 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 CDK1P06493 297 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 CD28P10747 220 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 FSTP19883 344 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 MPV17LQ2QL34 196 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 FBLN7Q53RD9 439 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 SLC16A12Q6ZSM3 486 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 LYPD6Q86Y78 171 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 LYG1Q8N1E2 194 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-216ENST00000494613 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 NRG4Q8WWG1 115 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 RBM14Q96PK6 669 aaKnown RBP12.48□□□□□ -0.41
LIMS2-216ENST00000494613 LIN7BQ9HAP6 207 aa12.48□□□□□ -0.41
LIMS2-216ENST00000494613 MRPS28Q9Y2Q9 187 aaKnown RBP12.48□□□□□ -0.41
LIMS2-216ENST00000494613 PEX14O75381 377 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 MNDAP41218 407 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 ARHGDIBP52566 201 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 EMX1Q04741 257 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-216ENST00000494613 ACSM3Q53FZ2 586 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 ARSJQ5FYB0 599 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-216ENST00000494613 CCDC144NLQ6NUI1 221 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 CAPSLQ8WWF8 208 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 MYDGFQ969H8 173 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 MRPS24Q96EL2 167 aaKnown RBP12.47□□□□□ -0.41
LIMS2-216ENST00000494613 BANF2Q9H503 90 aa12.47□□□□□ -0.41
LIMS2-216ENST00000494613 TET2Q6N021 2002 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-216ENST00000494613 TMEM30CPA0ZSE6 113 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A20PA6NIJ5 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A12PA8MX19 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 FAM90A5PA8MXJ8 464 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
LIMS2-216ENST00000494613 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms