RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 COL10A1Q03692 680 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 RBMY1FQ15415 496 aaKnown RBP5.13□□□□□ -1.59
SNX13-210ENST00000494402 ZNF404Q494X3 552 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 TMEM128Q5BJH2 165 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 TCEAL5Q5H9L2 206 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 LPCAT3Q6P1A2 487 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 MOB1BQ7L9L4 216 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 ZNF567Q8N184 647 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 SLC25A45Q8N413 288 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 NATD1Q8N6N6 113 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 UBL4BQ8N7F7 174 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 Q8NBF4 154 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 OR4M1Q8NGD0 313 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 DCAKDQ8WVC6 231 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 TCEAL3Q969E4 200 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 LINC00477Q96M19 166 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 PFDN5Q99471 154 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 GNB1LQ9BYB4 327 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 SPNS1Q9H2V7 528 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 PTGES2Q9H7Z7 377 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 SLCO1B3Q9NPD5 702 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 PLSCR3Q9NRY6 295 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 MRPL27Q9P0M9 148 aaKnown RBP5.13□□□□□ -1.59
SNX13-210ENST00000494402 TMEM216Q9P0N5 145 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 PKIGQ9Y2B9 76 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 INSIG2Q9Y5U4 225 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 NUBP2Q9Y5Y2 271 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 WDR7Q9Y4E6 1490 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
SNX13-210ENST00000494402 CEP152O94986 1710 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 IGLV8-61A0A075B6I0 122 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 A0A0G2JN53 185 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 PLAC8L1A1L4L8 177 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 MYBPHLA2RUH7 354 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 UPK1AO00322 258 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 SLC17A3O00476 420 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 FFAR1O14842 300 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 CST8O60676 142 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 ZFAND5O76080 213 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 KCNK2O95069 426 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 BGLAPP02818 100 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 CRYBA1P05813 215 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 PFN1P07737 140 aaKnown RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 ZNF133P52736 654 aaPredicted RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 GFERP55789 205 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 RPS24P62847 133 aaKnown RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 RUNX1Q01196 453 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 PAX8Q06710 450 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 PNOCQ13519 176 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 LY6DQ14210 128 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 IRF4Q15306 451 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 SURF2Q15527 256 aaPredicted RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 GUCA2BQ16661 112 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 FAM201AQ5SY85 155 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 TMEM78Q5T7P6 136 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 ARL9Q6T311 187 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 TMEM205Q6UW68 189 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 C5orf46Q6UWT4 87 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 TMPPEQ6ZT21 453 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 SLC16A13Q7RTY0 426 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 HSD17B13Q7Z5P4 300 aaPredicted RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 TMEM179BQ7Z7N9 219 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 ZNF614Q8N883 585 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 OR52L1Q8NGH7 329 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 NEURL3Q96EH8 262 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 BMFQ96LC9 184 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 CDX2Q99626 313 aaPredicted RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 TMEM243Q9BU79 118 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 CTSZQ9UBR2 303 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 ZNF780BQ9Y6R6 833 aa5.12□□□□□ -1.59
SNX13-210ENST00000494402 YTHDC2Q9H6S0 1430 aaKnown RBP5.12□□□□□ -1.59
SNX13-210ENST00000494402 A0A1W2PQ67 120 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 MAP1LC3B2A6NCE7 125 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 CCDC22O60826 627 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 CCNKO75909 580 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 APOC1P02654 83 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 TFPTP0C1Z6 253 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 PATE4P0C8F1 98 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 GZMHP20718 246 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 GNB1P62873 340 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 RUNX3Q13761 415 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 AKR1C8PQ5T2L2 129 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 CASC10Q5T4H9 136 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 SAMD13Q5VXD3 122 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 NANOGP8Q6NSW7 305 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 C20orf196Q8IYI0 205 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 SLC35E1Q96K37 410 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 MAP1LC3BQ9GZQ8 125 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 ZNF702PQ9H963 129 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 NANOGQ9H9S0 305 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 LRTM1Q9HBL6 345 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 TAS2R1Q9NYW7 299 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 RSL24D1Q9UHA3 163 aaKnown RBP5.11□□□□□ -1.59
SNX13-210ENST00000494402 KLK13Q9UKR3 277 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 RFX7Q2KHR2 1363 aa5.11□□□□□ -1.59
SNX13-210ENST00000494402 IGHV3-35A0A0C4DH35 117 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms