RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 BET1O15155 118 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 DIRAS3O95661 229 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 PTBP3O95758 552 aaKnown RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 TK1P04183 234 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 HOXB5P09067 269 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF250P15622 560 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 RCC1P18754 421 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 PSMB6P28072 239 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 KCNJ3P48549 501 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 FABP6P51161 128 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 UCNP55089 124 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 CYCSP99999 105 aaKnown RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 HMGN3Q15651 99 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 GGNBP1Q5YKI7 109 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 PRSS54Q6PEW0 395 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 FIP1L1Q6UN15 594 aaKnown RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF546Q86UE3 836 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LDLRAD3Q86YD5 345 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 FAM219AQ8IW50 185 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 H1FOOQ8IZA3 346 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 FAM185AQ8N0U4 392 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 LHFPL5Q8TAF8 219 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 THAP6Q8TBB0 222 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 DCUN1D4Q92564 292 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 SNRNP40Q96DI7 357 aaKnown RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 VRK1Q99986 396 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-208ENST00000494028 SUCNR1Q9BXA5 334 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 TMEM165Q9HC07 324 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 RAXQ9Y2V3 346 aa8.99□□□□□ -0.97
CLCN6-208ENST00000494028 IGLV3-9A0A075B6K5 115 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 MSGN1A6NI15 193 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 POM121CA8CG34 1229 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 CRYAAP02489 173 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 CTXN2P0C2S0 81 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 EGR1P18146 543 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 GLRXP35754 106 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 AP2S1P53680 142 aaPredicted RBP8.98□□□□□ -0.97
CLCN6-208ENST00000494028 FAM27E3Q08E93 113 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 RAB32Q13637 225 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 UNQ6494/PRO21346Q6UXR6 183 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 ACOT7LQ6ZUV0 252 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 PRR7Q8TB68 274 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 TMEM171Q8WVE6 324 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 SECTM1Q8WVN6 248 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 ST8SIA2Q92186 375 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 MSI2Q96DH6 328 aaKnown RBP8.98□□□□□ -0.97
CLCN6-208ENST00000494028 MUCL1Q96DR8 90 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 C18orf12Q96KH6 178 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 TP53RKQ96S44 253 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 SYT3Q9BQG1 590 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 RNF126Q9BV68 326 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 METTL8Q9H825 291 aaKnown RBP8.98□□□□□ -0.97
CLCN6-208ENST00000494028 MBNL3Q9NUK0 354 aaKnown RBP8.98□□□□□ -0.97
CLCN6-208ENST00000494028 UFSP2Q9NUQ7 469 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 ASF1BQ9NVP2 202 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 OR5AC2Q9NZP5 309 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 JKAMPQ9P055 326 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 OR1A1Q9P1Q5 309 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 SH3BGRL2Q9UJC5 107 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 TANC2Q9HCD6 1990 aa8.98□□□□□ -0.97
CLCN6-208ENST00000494028 LOC400499M0QZD8 3231 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 TMEM30CPA0ZSE6 113 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 H7C1Q1 480 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 GPR31O00270 319 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 SH2D1BO14796 132 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 PHF1O43189 567 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 PSPNO60542 156 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 IGHV3-13P01766 116 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 RLN2P04090 185 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 TFF1P04155 84 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 PET100P0DJ07 73 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 LMO1P25800 156 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 GNRHRP30968 328 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 OR3A1P47881 315 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 KLF3P57682 345 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 S100A10P60903 97 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 RPS23P62266 143 aaKnown RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 MZT1Q08AG7 82 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 IAH1Q2TAA2 248 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 SMIM21Q3B7S5 101 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 SP6Q3SY56 376 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 C6orf183Q5T699 404 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 ALKAL2Q6UX46 152 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 ZNF818PQ6ZRF7 136 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 C22orf34Q6ZV56 151 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 TBC1D26Q86UD7 250 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 LGI3Q8N145 548 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 OR8H3Q8N146 312 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 SCARB1Q8WTV0 552 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 LRRC29Q8WV35 223 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 PCNPQ8WW12 178 aaKnown RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 RRNAD1Q96FB5 475 aaKnown RBP8.97□□□□□ -0.97
CLCN6-208ENST00000494028 COQ2Q96H96 371 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms