RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 WNT5BQ9H1J7 359 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 OR6C3Q9NZP0 311 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 PPIAL4AQ9Y536 164 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 A0A1W2PQD3 144 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 IFNA5P01569 189 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 ZNF41P51814 821 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-210ENST00000493582 ID3Q02535 119 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 Q6ZPA2 131 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 OR2T10Q8NGZ9 312 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 FGF14Q92915 247 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 ZNF160Q9HCG1 818 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 DNAJC4Q9NNZ3 241 aa10.1□□□□□ -0.79
HDAC4-210ENST00000493582 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
HDAC4-210ENST00000493582 LILRA1O75019 489 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 ZNF737O75373 536 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 HRASP01112 189 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 PPYP01298 95 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 EFNA3P52797 238 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 UCP3P55916 312 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 HHEXQ03014 270 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-210ENST00000493582 CYP2G1PQ6ZSU1 146 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 RNASE8Q8TDE3 154 aaKnown RBP10.09□□□□□ -0.79
HDAC4-210ENST00000493582 P2RX4Q99571 388 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 ZNF286AQ9HBT8 521 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 REV3LO60673 3130 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 BAXQ07812 192 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 IZUMO4Q1ZYL8 232 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 MRGPRGQ86SM5 289 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 BATF2Q8N1L9 274 aa10.09□□□□□ -0.79
HDAC4-210ENST00000493582 A0A1W2PR80 420 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 BLACEA4D250 179 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 DHRS3O75911 302 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 IL6RP08887 468 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 HNRNPA1P09651 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 DTYMKP23919 212 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 GCH1P30793 250 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 IL24Q13007 206 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 ENDOGQ14249 297 aaKnown RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 C11orf42Q8N5U0 333 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 RASL10BQ96S79 203 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 SPIN2AQ99865 258 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 SPIN2BQ9BPZ2 258 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MIEN1Q9BRT3 115 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 OR51I2Q9H344 312 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 KLHL13Q9P2N7 655 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MAP1LC3B2A6NCE7 125 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 TMEM150CB9EJG8 249 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 HNRNPA2B1P22626 353 aaKnown RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 RPS18P62269 152 aaKnown RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 DLX2Q07687 328 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MYPOPQ86VE0 399 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 SCGB1C1Q8TD33 95 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 TMEM234Q8WY98 164 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 ZCCHC14Q8WYQ9 949 aaKnown RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MAP1LC3BQ9GZQ8 125 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 SLC7A10Q9NS82 523 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 WDFY3Q8IZQ1 3526 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 LIPT2A6NK58 231 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 POU2F2P09086 479 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 FOSL2P15408 326 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 FOXL2P58012 376 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 HIST1H3AP68431 136 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 MYBPHQ13203 477 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 COTL1Q14019 142 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 FBXW9Q5XUX1 488 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 THAP3Q8WTV1 239 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 DEFB118Q96PH6 123 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 PLK3Q9H4B4 646 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-210ENST00000493582 RNF115Q9Y4L5 304 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
HDAC4-210ENST00000493582 LTBP2Q14767 1821 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 ATG2AQ2TAZ0 1938 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 DOCK11Q5JSL3 2073 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 EFNA2O43921 213 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 KBTBD11O94819 623 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 CHRNA7P36544 502 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 NMSQ5H8A3 153 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 PARLQ9H300 379 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 FOXJ2Q9P0K8 574 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 CHD9Q3L8U1 2897 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 IGKV1-27A0A075B6S5 117 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 ZNF814B7Z6K7 855 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 IGHG1P01857 330 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
HDAC4-210ENST00000493582 FBXW4P57775 412 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-210ENST00000493582 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 Q6ZSR6 202 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-210ENST00000493582 GATAD1Q8WUU5 269 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 PP6455Q8WZ26 134 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 LHX4Q969G2 390 aa10.07□□□□□ -0.8
HDAC4-210ENST00000493582 ZNF845Q96IR2 970 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-210ENST00000493582 GPR35Q9HC97 309 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms