RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 OCR1Q9BZK8 76 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ARMC7Q9H6L4 198 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 NIPAL2Q9H841 368 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SRD5A3Q9H8P0 318 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SIRT7Q9NRC8 400 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 CENPMQ9NSP4 180 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM106BQ9NUM4 274 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 DCAF13Q9NV06 445 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SLCO1C1Q9NYB5 712 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ZNRD1Q9P1U0 126 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 CD300AQ9UGN4 299 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SAMHD1Q9Y3Z3 626 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 VWFP04275 2813 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TGP01266 2768 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TRBV2A0A0J9YWF9 115 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 DHRS12A0PJE2 317 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 FAM168BA1KXE4 195 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 GMNCA6NCL1 334 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TRIM64CA6NLI5 447 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 C12orf71A8MTZ7 269 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ANKRD65E5RJM6 399 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 F8VVB4 439 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 F8VWA3 439 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 H0Y9J4 135 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 M0R135 149 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TNFRSF11BO00300 401 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TCF21O43680 179 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SYNGR1O43759 233 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PRKYO43930 277 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 FCGR3BO75015 233 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 MTRF1O75570 445 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 RHBDL1O75783 438 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 RENP00797 406 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 FABP3P05413 133 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CSF3P09919 207 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SPP1P10451 314 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PIPP12273 146 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 MGMTP16455 207 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF19P17023 458 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CRYBB2P43320 205 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CX3CR1P49238 355 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF121P58317 390 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 FGF12P61328 243 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 BTG1P62324 171 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 GNB2P62879 340 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 UBA52P62987 128 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 HIST1H3AP68431 136 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SRPXP78539 464 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PAX2Q02962 417 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 AQP6Q13520 282 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 EIF2B1Q14232 305 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 MAPRE2Q15555 327 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 LY6EQ16553 131 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PCK2Q16822 640 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 RFX4Q33E94 735 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ANKDD1AQ495B1 522 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 HSP90B2PQ58FF3 399 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ARMCX4Q5H9R4 360 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 COQ5Q5HYK3 327 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 LDLRAD2Q5SZI1 272 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 C9orf66Q5T8R8 295 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 HIST2H3PS2Q5TEC6 136 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 C5orf46Q6UWT4 87 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 HIST2H3AQ71DI3 136 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 DPY19L4Q7Z388 723 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 NRARPQ7Z6K4 114 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PIGWQ7Z7B1 504 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CYP4Z1Q86W10 505 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ERI1Q8IV48 349 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 DYNAPQ8N1N2 210 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 KIR3DL3Q8N743 410 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TPRX1Q8N7U7 411 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TCEANCQ8N8B7 351 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 OR10G2Q8NGC3 310 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 OR8B12Q8NGG6 310 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 OR10AC1Q8NH08 325 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 OR51F2Q8NH61 342 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 UBALD1Q8TB05 177 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TRMT10AQ8TBZ6 339 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 LRRC29Q8WV35 223 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CANT1Q8WVQ1 401 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 LIPHQ8WWY8 451 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 LZICQ8WZA0 190 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SLAMF6Q96DU3 332 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF799Q96GE5 643 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PYURFQ96I23 114 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TECTBQ96PL2 329 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CCL13Q99616 98 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PITX2Q99697 317 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 THTPAQ9BU02 230 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 ALG12Q9BV10 488 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CHIAQ9BZP6 476 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SLC19A3Q9BZV2 496 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 OR51V1Q9H2C8 321 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 EFCAB1Q9HAE3 211 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SIAEQ9HAT2 523 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 RNPEPL1Q9HAU8 725 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 NTN4Q9HB63 628 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM165Q9HC07 324 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 GPR173Q9NS66 373 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms