RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
NUP50-217ENST00000491860 FGF20Q9NP95 211 aaPredicted RBP6.99□□□□□ -1.29
NUP50-217ENST00000491860 TMEM138Q9NPI0 162 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 CALYQ9NYX4 217 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 CKLFQ9UBR5 152 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 EXOSC1Q9Y3B2 195 aaKnown RBP6.99□□□□□ -1.29
NUP50-217ENST00000491860 DNAH3Q8TD57 4116 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 TRAV24A0A0B4J272 114 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 PSMB11A5LHX3 300 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A18PA6NE21 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A16PA6NEW6 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A20PA6NIJ5 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A9PA6NNJ1 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A12PA8MX19 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A5PA8MXJ8 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 CCRL2O00421 344 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 TXNL1O43396 289 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A15PP0C7V4 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A13PP0C7W8 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A14PP0C7W9 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 FAM90A24PP0C7X0 464 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 CGB3P0DN86 165 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 CGB7P0DN87 165 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 IL3RAP26951 378 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 ZNF93P35789 620 aaPredicted RBP6.98□□□□□ -1.29
NUP50-217ENST00000491860 OR3A4PP47883 348 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 SLC35B1P78383 322 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 ZSCAN26Q16670 478 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 C17orf58Q2M2W7 97 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 TRAT1Q6PIZ9 186 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 CDH26Q8IXH8 852 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 LYG1Q8N1E2 194 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 STX19Q8N4C7 294 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 C8orf31Q8N9H6 132 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 SETD9Q8NE22 299 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 OR10X1Q8NGY0 326 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 TMEM106AQ96A25 262 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 PHF21AQ96BD5 680 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 SMIM19Q96E16 107 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 MRPS24Q96EL2 167 aaKnown RBP6.98□□□□□ -1.29
NUP50-217ENST00000491860 ZNF649Q9BS31 505 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 MCRIP2Q9BUT9 160 aaKnown RBP6.98□□□□□ -1.29
NUP50-217ENST00000491860 DPCDQ9BVM2 203 aaPredicted RBP6.98□□□□□ -1.29
NUP50-217ENST00000491860 S100A14Q9HCY8 104 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 ZFP57Q9NU63 452 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
NUP50-217ENST00000491860 KIF25Q9UIL4 384 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
NUP50-217ENST00000491860 TMEM30CPA0ZSE6 113 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 EBAG9O00559 213 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 HSPB6O14558 160 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 ORC5O43913 435 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 CA11O75493 328 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 GPX5O75715 221 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 OR7C1O76099 320 aaPredicted RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 HTR3BO95264 441 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 LIMS3P0CW19 117 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 LIMS4P0CW20 117 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 GTF2F2P13984 249 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 TMEM11P17152 192 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 BDKRB2P30411 391 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 GP2P55259 537 aaKnown RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 RBM11P57052 281 aaKnown RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 TAS2R43P59537 309 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 ZNF816Q0VGE8 651 aaPredicted RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 RIPK1Q13546 671 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 HES1Q14469 280 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 TMEM95Q3KNT9 176 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 YIF1BQ5BJH7 314 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 OXLD1Q5BKU9 147 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 KHDC1LQ5JSQ8 128 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 DDI2Q5TDH0 399 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 RSBN1Q5VWQ0 802 aaPredicted RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 TTC23Q5W5X9 447 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 Q6ZS46 218 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 FOXRED2Q8IWF2 684 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 OR13A1Q8NGR1 328 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 OR52N1Q8NH53 320 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 MYDGFQ969H8 173 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 PPIL3Q9H2H8 161 aaKnown RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 AMBNQ9NP70 447 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP50-217ENST00000491860 BABAM2Q9NXR7 383 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 ING3Q9NXR8 418 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 TAS2R4Q9NYW5 299 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 ING4Q9UNL4 249 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 DIMT1Q9UNQ2 313 aaKnown RBP6.97□□□□□ -1.29
NUP50-217ENST00000491860 PSG11Q9UQ72 335 aa6.97□□□□□ -1.29
NUP50-217ENST00000491860 A0A1W2PPI3 338 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 A0A1W2PRX2 142 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 FAM172BPA6NC97 362 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 FAM90A10PA6NDY2 464 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 FAM90A7PA6NKC0 464 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 FAM90A23PA8MXZ1 464 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 E9PI62 339 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 HSD17B6O14756 317 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms