RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 C11orf72Q8NBR9 251 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR4S2Q8NH73 311 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 Q8WTZ3 238 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 FRZBQ92765 325 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 QKIQ96PU8 341 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR2A5Q96R48 311 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 EMC6Q9BV81 110 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 SUCNR1Q9BXA5 334 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR51I1Q9H343 314 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 VSIRQ9H7M9 311 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 INIPQ9NRY2 104 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF222Q9UK12 451 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 POLR1DQ9Y2S0 133 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZBED9Q6R2W3 1325 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A1W2PP64 1363 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGHV5-51A0A0C4DH38 117 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A0J9YXV3 536 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 GABARAPO95166 117 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 FABP3P05413 133 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 LINC00614P0C842 121 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 KCNE1P15382 129 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 TAC1P20366 129 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 TALDO1P37837 337 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 ACOT2P49753 483 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 ERFP50548 548 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 CCL23P55773 120 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 UBE2NP61088 152 aaKnown RBP2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 DYNLL1P63167 89 aaKnown RBP2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC35A2P78381 396 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 BTN3A2P78410 334 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 TNFRSF9Q07011 255 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 PMVKQ15126 192 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 RSU1Q15404 277 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 ARHGAP11BQ3KRB8 267 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM97Q5BJF2 176 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 CLEC19AQ6UXS0 136 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC36A1Q7Z2H8 476 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM161BQ8NDZ6 487 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR5W2Q8NH69 310 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 KCTD4Q8WVF5 259 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 SIGMAR1Q99720 223 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 DDA1Q9BW61 102 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 MROQ9BYG7 248 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 NMNAT1Q9HAN9 279 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 HEBP1Q9NRV9 189 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 DKKL1Q9UK85 242 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 HHLA2Q9UM44 414 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 SIGLEC7Q9Y286 467 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 YTHDF2Q9Y5A9 579 aaKnown RBP2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 NACADO15069 1562 aa2.85□□□□□ -1.95
HMGB1P38-201ENST00000490557 PIKFYVEQ9Y2I7 2098 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGHV1-69DA0A0B4J2H0 117 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 VPS37CA5D8V6 355 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 UPK2O00526 184 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 NOS1APO75052 506 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 DHRS3O75911 302 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 HAND1O96004 215 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 DHFRP00374 187 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 IL3P08700 152 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 NPY1RP25929 384 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 AGTR1P30556 359 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 CD70P32970 193 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 APLNRP35414 380 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 CDKN2BP42772 138 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC18A1P54219 525 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 NAA20P61599 178 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 TFAMQ00059 246 aaKnown RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 IFITM3Q01628 133 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 RGNQ15493 299 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 ABCA11PQ4W5N1 156 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 ACSBG2Q5FVE4 666 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10K2Q6IF99 312 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 UBALD2Q8IYN6 164 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 C12orf29Q8N999 325 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR1P1Q8NH06 330 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF420Q8TAQ5 688 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZHX1-C8orf76Q96EF9 292 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 PDXPQ96GD0 296 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SMIM8Q96KF7 97 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 LINC00477Q96M19 166 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SPIN2AQ99865 258 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SPIN2BQ9BPZ2 258 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 CMSS1Q9BQ75 279 aaKnown RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 KIFC1Q9BW19 673 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 RSPO3Q9BXY4 272 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 TRIM4Q9C037 500 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC25A31Q9H0C2 315 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR51E2Q9H255 320 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 TXNIPQ9H3M7 391 aa2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF430Q9H8G1 570 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 RBFOX1Q9NWB1 397 aaKnown RBP2.84□□□□□ -1.95
HMGB1P38-201ENST00000490557 SMPXQ9UHP9 88 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms