RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 IL36RNQ9UBH0 155 aa5.05□□□□□ -1.6
PRPF40A-210ENST00000489741 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.05□□□□□ -1.6
PRPF40A-210ENST00000489741 SLC7A11Q9UPY5 501 aa5.05□□□□□ -1.6
PRPF40A-210ENST00000489741 HILPDAQ9Y5L2 63 aa5.05□□□□□ -1.6
PRPF40A-210ENST00000489741 TRBV2A0A0J9YWF9 115 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM230AA0A1W2PPH8 454 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 A0A1W2PQL4 384 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A18PA6NE21 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A16PA6NEW6 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A20PA6NIJ5 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 METTL15A6NJ78 407 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A9PA6NNJ1 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A12PA8MX19 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A5PA8MXJ8 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ZNF670-ZNF695F2Z2N8 137 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 LY6LH3BQJ8 138 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 M0R129 80 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 SYT7O43581 403 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 MITFO75030 526 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ENTPD6O75354 484 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 SULT1C4O75897 302 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM107AO95990 144 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 HAND1O96004 215 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ALDOBP05062 364 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 OR2T7P0C7T2 308 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A15PP0C7V4 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A13PP0C7W8 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A14PP0C7W9 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM90A24PP0C7X0 464 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 CGB3P0DN86 165 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 CGB7P0DN87 165 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 HTR1DP28221 377 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 VDAC2P45880 294 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 OR3A1P47881 315 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 SLC34A1Q06495 639 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 DYNC1I2Q13409 638 aaKnown RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 PMS2P11Q13670 270 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 TWIST1Q15672 202 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 VAX1Q5SQQ9 334 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 KDM4DQ6B0I6 523 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 HEPN1Q6WQI6 88 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ZBTB49Q6ZSB9 765 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 SLC25A26Q70HW3 274 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 UTS2BQ765I0 119 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 EGFL6Q8IUX8 553 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 Q8IYB0 196 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ENTHD1Q8IYW4 607 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ABHD12Q8N2K0 398 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 PRSS35Q8N3Z0 413 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 ZNF676Q8N7Q3 588 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 TPRX1Q8N7U7 411 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 TRMT10AQ8TBZ6 339 aaKnown RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 SLAMF9Q96A28 289 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 RBM14Q96PK6 669 aaKnown RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 CLEC7AQ9BXN2 247 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 CHST5Q9GZS9 411 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 INPP5EQ9NRR6 644 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 POMPQ9Y244 141 aa5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 UBE2J1Q9Y385 318 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 TSSC4Q9Y5U2 329 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-210ENST00000489741 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 A0A087X0M5 115 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 IGKV1-12A0A0C4DH73 117 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 A0A1B0GX30 115 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 WI2-2373I1.2A0A1W2PRP0 233 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 J3QRE1 110 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 PRYO14603 147 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 GATBO75879 557 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 OR2F2O95006 317 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RPP14O95059 124 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 SERPINA3P01011 423 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 IGKV1D-12P01611 117 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 MT-ND2P03891 347 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 PSG1P11464 419 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 BCL3P20749 454 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CD24P25063 80 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 HTR1FP30939 366 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 POLR2IP36954 125 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 KIR3DL2P43630 455 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RBP2P50120 134 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 P2RX3P56373 397 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CDC42P60953 191 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 PDZK1IP1Q13113 114 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 IL18R1Q13478 541 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 FLOT2Q14254 428 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 GRK1Q15835 563 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 UTF1Q5T230 341 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CCDC144NLQ6NUI1 221 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 Q6P435 159 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 C10orf99Q6UWK7 81 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RNF144BQ7Z419 303 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CENPVQ7Z7K6 275 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 SPATA24Q86W54 205 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 GID4Q8IVV7 300 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RDH10Q8IZV5 341 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 FAM58AQ8N1B3 248 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 YIPF7Q8N8F6 280 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CCDC197Q8NCU1 140 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms