RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 SHISA9B4DS77 424 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 H7C1Q1 480 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SIAH2O43255 324 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SPRY3O43610 288 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SSNA1O43805 119 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 HPXP02790 462 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 CD3EP07766 207 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 GLRA1P23415 457 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FAM90A1Q86YD7 464 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 RDH5Q92781 318 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 Q9N2K0 584 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 VSIG4Q9Y279 399 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 SRRM5B3KS81 715 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SLC33A1O00400 549 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 SDCBPO00560 298 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 HS3ST1O14792 307 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 HAND1O96004 215 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 IGHV1-46P01743 117 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FPR2P25090 351 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 LMO1P25800 156 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FCN2Q15485 313 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SURF2Q15527 256 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 PAN3Q58A45 887 aaKnown RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 BEX5Q5H9J7 111 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 Q6ZPA2 131 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 TMED4Q7Z7H5 227 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SLC25A42Q86VD7 318 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 TCTE3Q8IZS6 198 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 ASCC1Q8N9N2 400 aaKnown RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 ERGIC1Q969X5 290 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
NELFE-209ENST00000488426 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 CHD3Q12873 2000 aaKnown RBP10.7□□□□□ -0.7
NELFE-209ENST00000488426 PLCE1Q9P212 2302 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 KIR2DS1A0A191URI9 304 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 HSPB6O14558 160 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 WNT9BO14905 357 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 CD55P08174 381 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 OR4E1P0C645 316 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 OR5H8P0DN80 308 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 KIR2DS4P43632 304 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 TAS2R31P59538 309 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 UBE2MP61081 183 aaKnown RBP10.69□□□□□ -0.7
NELFE-209ENST00000488426 TNFAIP6P98066 277 aaPredicted RBP10.69□□□□□ -0.7
NELFE-209ENST00000488426 CD83Q01151 205 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 KIR2DS1Q14954 304 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 C4orf46Q504U0 113 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 AADACL3Q5VUY0 350 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 PEG10Q86TG7 708 aaKnown RBP10.69□□□□□ -0.7
NELFE-209ENST00000488426 MARCH1Q8TCQ1 289 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 ITLN1Q8WWA0 313 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 WDR13Q9H1Z4 485 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 RANGRFQ9HD47 186 aaPredicted RBP10.69□□□□□ -0.7
NELFE-209ENST00000488426 ZNF69Q9UC07 566 aa10.69□□□□□ -0.7
NELFE-209ENST00000488426 A8MV72 311 aaPredicted RBP10.68□□□□□ -0.7
NELFE-209ENST00000488426 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 SIRPB1O00241 398 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 SERPINF1P36955 418 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 GMFBP60983 142 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
NELFE-209ENST00000488426 ZNF880Q6PDB4 577 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 DHRS11Q6UWP2 260 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 MOB1BQ7L9L4 216 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 MOGAT3Q86VF5 341 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 GAPTQ8N292 157 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 OR11H7Q8NGC8 314 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 MRPL30Q8TCC3 161 aaKnown RBP10.68□□□□□ -0.7
NELFE-209ENST00000488426 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
NELFE-209ENST00000488426 PLEKHF2Q9H8W4 249 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 MGAT4AQ9UM21 535 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 GPR132Q9UNW8 380 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 RNF115Q9Y4L5 304 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 C17orf100A8MU93 164 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 M0R233 179 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 SHOXO15266 292 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 CTXN2P0C2S0 81 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 GLP1RP43220 463 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 KCNJ3P48549 501 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 NPY4RP50391 375 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 ZNF497Q6ZNH5 498 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 SPICQ8N5J4 248 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 Q8TCH9 128 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 DECR2Q9NUI1 292 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 OR14J1Q9UGF5 321 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 NPTNQ9Y639 398 aa10.68□□□□□ -0.7
NELFE-209ENST00000488426 TRDCB7Z8K6 153 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 E7EQL1 145 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 FABP7O15540 132 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 LHBP01229 141 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 ANXA3P12429 323 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
NELFE-209ENST00000488426 NKX2-5P52952 324 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms