RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MSR1P21757 451 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 CD24P25063 80 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 CHI3L1P36222 383 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 DAP3P51398 398 aaKnown RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 CAPZA1P52907 286 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 UGT2B15P54855 530 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 EWSR1Q01844 656 aaKnown RBP eCLIP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 SPIBQ01892 262 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 DHODHQ02127 395 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 CD47Q08722 323 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF616Q08AN1 781 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TRAP1Q12931 704 aaKnown RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 GK2Q14410 553 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF273Q14593 569 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 OR4F3Q6IEY1 312 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 OR4A47Q6IF82 309 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 PRR27Q6MZM9 219 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 WDR82Q6UXN9 313 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TSEN54Q7Z6J9 526 aaKnown RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 SPATA24Q86W54 205 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 STPG2Q8N412 459 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 OR5T2Q8NGG2 359 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 OR52M1Q8NGK5 317 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ANGPTL6Q8NI99 470 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 DCUN1D4Q92564 292 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TMEM106AQ96A25 262 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 SLC35A5Q9BS91 424 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TXNIPQ9H3M7 391 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ARMC7Q9H6L4 198 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TUBA4BQ9H853 241 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 Q9H8V8 135 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 POLE4Q9NR33 117 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 HAO2Q9NYQ3 351 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 USE1Q9NZ43 259 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 STX18Q9P2W9 335 aaKnown RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ATPIF1Q9UII2 106 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF391Q9UJN7 358 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 HILPDAQ9Y5L2 63 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1W2PRG6 482 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 SERPINE3A8MV23 424 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 PHOX2AO14813 284 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 DIRAS3O95661 229 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 TFF1P04155 84 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 S100A9P06702 114 aaKnown RBP3.33□□□□□ -1.88
BRCA1-217ENST00000487825 OR8U9P0C7N5 309 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 ASAH2BP0C7U1 165 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 LINC00032P0C843 101 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF823P16415 610 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 CCL3L1P16619 93 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 GALP22466 123 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 CRISP3P54108 245 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 NAA20P61599 178 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 DR1Q01658 176 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 MZT1Q08AG7 82 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 IL18R1Q13478 541 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 WDR86Q86TI4 376 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 ELMOD2Q8IZ81 293 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 GVQW1Q8N7I0 195 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 CCNYL1Q8N7R7 359 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 OR1N2Q8NGR9 330 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 OR13D1Q8NGV5 346 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 OR1F12Q8NHA8 337 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 MYOZ3Q8TDC0 251 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 SPRYD4Q8WW59 207 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-217ENST00000487825 ALG12Q9BV10 488 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 C1orf50Q9BV19 199 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 TMED9Q9BVK6 235 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 CALML5Q9NZT1 146 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 TMEM216Q9P0N5 145 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF229Q9UJW7 825 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 IFT52Q9Y366 437 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 DNAJC15Q9Y5T4 150 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 HSPE1-MOB4S4R3N1 261 aa3.33□□□□□ -1.88
BRCA1-217ENST00000487825 A0A1W2PPM1 405 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 ANXA2P2A6NMY6 339 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 CD300LBA8K4G0 201 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 C17orf98A8MV24 154 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 E9PBE3 544 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 I3L521 148 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 AZIN1O14977 448 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF254O75437 659 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 CPSF4O95639 269 aaKnown RBP3.32□□□□□ -1.88
BRCA1-217ENST00000487825 IGLV1-51P01701 117 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 IGHG2P01859 326 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 RBP4P02753 201 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 KRT8P05787 483 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 BCHEP06276 602 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 BCL3P20749 454 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 BRS3P32247 399 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 GUCA1AP43080 201 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-217ENST00000487825 DLX6P56179 175 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 CLDN8P56748 225 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 RPL31P62899 125 aaKnown RBP3.32□□□□□ -1.88
BRCA1-217ENST00000487825 CTAG1AP78358 180 aa3.32□□□□□ -1.88
BRCA1-217ENST00000487825 RUNX1Q01196 453 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms