RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ELP2Q6IA86 826 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 GLDNQ6ZMI3 551 aaPredicted RBP7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 MKXQ8IYA7 352 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 DEFB108BQ8NET1 73 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 OR2Z1Q8NG97 314 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 OR56B2PQ8NGI1 322 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 NPRL2Q8WTW4 380 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 FAM216AQ8WUB2 273 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 ITLN1Q8WWA0 313 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 GIMAP1Q8WWP7 306 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 ASB13Q8WXK3 278 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 RAB1CQ92928 201 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 RAB39BQ96DA2 213 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 CMBLQ96DG6 245 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 ELMOD3Q96FG2 381 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 Q96M66 194 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 SCGB3A2Q96PL1 93 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 PAPOLGQ9BWT3 736 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 CHST6Q9GZX3 395 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 BANF2Q9H503 90 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 ELL3Q9HB65 397 aaPredicted RBP7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 MRPL15Q9P015 296 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF69Q9UC07 566 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 PURGQ9UJV8 347 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 NPTNQ9Y639 398 aa7.83□□□□□ -1.16
TMEM39A-208ENST00000486159 A0A0A6YYD4 124 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 PLSCR5A0PG75 271 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 UBE2QL1A1L167 161 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF850A8MQ14 1090 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ARPC1BO15143 372 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 SOCS1O15524 211 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 TIMM8AO60220 97 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 CREBL2O60519 120 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 HTR3BO95264 441 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 IFNA6P05013 189 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 GNB3P16520 340 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 SERPINA2P20848 420 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ERP29P30040 261 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 COMPP49747 757 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 TMEM50BP56557 158 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ARFRP1Q13795 201 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 AWAT1Q58HT5 328 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 NHLRC3Q5JS37 347 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 FAM209AQ5JX71 171 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 VAX1Q5SQQ9 334 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 FAM201AQ5SY85 155 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 LINC00596Q86U02 117 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 TMEM17Q86X19 198 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 HOGA1Q86XE5 327 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF573Q86YE8 665 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 OSR2Q8N2R0 312 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ARRDC1Q8N5I2 433 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 SPICQ8N5J4 248 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 C3orf56Q8N813 242 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 OR51S1Q8NGJ8 323 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 ST8SIA4Q92187 359 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 NKX3-1Q99801 234 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 GINS4Q9BRT9 223 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 PECRQ9BY49 303 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 PKIBQ9C010 78 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 TMEM106BQ9NUM4 274 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 WNK2Q9Y3S1 2297 aa7.82□□□□□ -1.16
TMEM39A-208ENST00000486159 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 IGKV1-27A0A075B6S5 117 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 MDFIC2A0A1B0GVS7 189 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 TRIM77I1YAP6 450 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 SPRY1O43609 319 aaPredicted RBP7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 SSX5O60225 188 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 CYB5R3P00387 301 aaPredicted RBP7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 C1QBP02746 253 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 AMY2AP04746 511 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 GLAP06280 429 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 CD55P08174 381 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 ADH4P08319 380 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF735P0CB33 412 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 SULT1A3P0DMM9 295 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 SULT1A4P0DMN0 295 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 ANXA3P12429 323 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 DTYMKP23919 212 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 ECI1P42126 302 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 UBE2MP61081 183 aaKnown RBP7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 UBA52P62987 128 aaKnown RBP7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 GNG3P63215 75 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 MRPS15P82914 257 aaKnown RBP7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 CD300CQ08708 224 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 PLAC9Q5JTB6 97 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 IDO2Q6ZQW0 420 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 RNF144BQ7Z419 303 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 BPIFB2Q8N4F0 458 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 OR10AD1Q8NGE0 317 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 OR5D18Q8NGL1 313 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 OR8S1Q8NH09 359 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 OR4K15Q8NH41 348 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 NANPQ8TBE9 248 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 OR5P3Q8WZ94 311 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 ARHGAP5-AS1Q96IT6 56 aa7.81□□□□□ -1.16
TMEM39A-208ENST00000486159 RNF170Q96K19 258 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms