RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 C18orf12Q96KH6 178 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 ARMC7Q9H6L4 198 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 TREM2Q9NZC2 230 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 CHST2Q9Y4C5 530 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 HECTD1Q9ULT8 2610 aa4.42□□□□□ -1.7
CCDC39-205ENST00000485055 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 A0A1W2PR80 420 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 OR5H1A6NKK0 313 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SHISA9B4DS77 424 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ZNHIT1O43257 154 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF432O94892 652 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ISG15P05161 165 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 KLK2P20151 261 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ARR3P36575 388 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PTH2RP49190 550 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 GZMMP51124 257 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PAX9P55771 341 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 TAS2R31P59538 309 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 RPL31P62899 125 aaKnown RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 NHLH2Q02577 135 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SYT6Q5T7P8 510 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 TMEM42Q69YG0 159 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SLC27A4Q6P1M0 643 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 FAM131AQ6UXB0 335 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 COX8CQ7Z4L0 72 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 C1orf174Q8IYL3 243 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 TMEM99Q8N816 258 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ZIC4Q8N9L1 334 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 STOML3Q8TAV4 291 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ZHX1-C8orf76Q96EF9 292 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 OR10C1Q96KK4 312 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ARHGDIGQ99819 225 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 COA4Q9NYJ1 87 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 TMEM181Q9P2C4 612 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ABCA12Q86UK0 2595 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CENPVL3A0A0U1RRI6 287 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PRORSD1PA6NEY8 169 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SEC14L6B5MCN3 397 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 H3BSA7 217 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PHYHO14832 338 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PHF1O43189 567 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CHP2O43745 196 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CXCL13O43927 109 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CA11O75493 328 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 LYPD3O95274 346 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 PTTG1O95997 202 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 FBP1P09467 338 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ACSM4P0C7M7 580 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 FASP25445 335 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SHC1P29353 583 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CTBP2P56545 445 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 LTBQ06643 244 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 LOXL1Q08397 574 aaPredicted RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CD300CQ08708 224 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 FAM27E3Q08E93 113 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 UGT2A3Q6UWM9 527 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CCDC90BQ9GZT6 254 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF442Q9H7R0 627 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 TESQ9UGI8 421 aaKnown RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SLC7A7Q9UM01 511 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 HHLA2Q9UM44 414 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 SLC7A11Q9UPY5 501 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 UTP20O75691 2785 aaKnown RBP4.41□□□□□ -1.7
CCDC39-205ENST00000485055 ITPR2Q14571 2701 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 CR1P17927 2039 aa4.41□□□□□ -1.7
CCDC39-205ENST00000485055 A0A1W2PP11 408 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 HSPB6O14558 160 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 SPAG7O75391 227 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 FSTL3O95633 263 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 IFNA2P01563 188 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 H2AFXP16104 143 aaPredicted RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 CRISP3P54108 245 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 GNG2P59768 71 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 NUTF2P61970 127 aaKnown RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 RGNQ15493 299 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 UBE2V2Q15819 145 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 NNATQ16517 81 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 LRRC75BQ2VPJ9 315 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 SPANXN4Q5MJ08 99 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 DHRS11Q6UWP2 260 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 Q6ZRG5 221 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 CALHM3Q86XJ0 350 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 GBGT1Q8N5D6 347 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF614Q8N883 585 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 LINC01560Q8TB33 94 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 DOK4Q8TEW6 326 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 MRPL24Q96A35 216 aaKnown RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 Q96MT0 163 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 NOL4LQ96MY1 436 aaPredicted RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 CLCC1Q96S66 551 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 S100A14Q9HCY8 104 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 B3GNT2Q9NY97 397 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 TAS2R16Q9NYV7 291 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 ZNF443Q9Y2A4 671 aaPredicted RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 FLVCR1Q9Y5Y0 555 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms