RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 KIR3DL3Q8N743 410 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 COQ2Q96H96 371 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 SULT4A1Q9BR01 284 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 FLNAP21333 2647 aaKnown RBP12.66□□□□□ -0.38
CCM2-215ENST00000482714 MEIKINA0A087WXM9 373 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 A0A1W2PQ09 198 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 M0R1W7 72 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 MFNGO00587 321 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 RBP4P02753 201 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 GLIPR1P48060 266 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
CCM2-215ENST00000482714 SRSF7Q16629 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCM2-215ENST00000482714 MOGAT2Q3SYC2 334 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 ZNF260Q3ZCT1 412 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 ZNF581Q9P0T4 197 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 WNK2Q9Y3S1 2297 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 ACANP16112 2415 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 SETD2Q9BYW2 2564 aaPredicted RBP12.65□□□□□ -0.38
CCM2-215ENST00000482714 UBE2QL1A1L167 161 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 HSPB6O14558 160 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 CTDSP2O14595 271 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 RGS5O15539 181 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 ORC5O43913 435 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 CLPXO76031 633 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 NAPSAO96009 420 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 CGB3P0DN86 165 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 CGB7P0DN87 165 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 TALDO1P37837 337 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 MNDAP41218 407 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 MRPS15P82914 257 aaKnown RBP12.65□□□□□ -0.38
CCM2-215ENST00000482714 HACD4Q5VWC8 232 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 FGFRL1Q8N441 504 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 DCUN1D5Q9BTE7 237 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 GAL3ST2Q9H3Q3 398 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 LINC00574Q9H8X3 128 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 UNKLQ9H9P5 680 aaKnown RBP12.65□□□□□ -0.38
CCM2-215ENST00000482714 C19orf12Q9NSK7 152 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 MBNL3Q9NUK0 354 aaKnown RBP12.65□□□□□ -0.38
CCM2-215ENST00000482714 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 KCNK7Q9Y2U2 307 aa12.65□□□□□ -0.38
CCM2-215ENST00000482714 TRAV18A0A075B6X5 111 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 ZNF729A6NN14 1252 aaPredicted RBP12.64□□□□□ -0.39
CCM2-215ENST00000482714 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 HPGDSO60760 199 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 CD3GP09693 182 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 ZNF728P0DKX0 622 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 ELK1P19419 428 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 CDK2P24941 298 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 METAP1DQ6UB28 335 aaPredicted RBP12.64□□□□□ -0.39
CCM2-215ENST00000482714 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 ZNF714Q96N38 554 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 CMSS1Q9BQ75 279 aaKnown RBP12.64□□□□□ -0.39
CCM2-215ENST00000482714 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 AK3Q9UIJ7 227 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 TRAPPC2LQ9UL33 140 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 ARHGAP32A7KAX9 2087 aa12.64□□□□□ -0.39
CCM2-215ENST00000482714 FAM25AB3EWG3 89 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 FAM25CB3EWG5 89 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 FAM25GB3EWG6 89 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 EIF4EP06730 217 aaKnown RBP12.63□□□□□ -0.39
CCM2-215ENST00000482714 GNB3P16520 340 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 S100A5P33763 92 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 TMEM30BQ3MIR4 351 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 TMEM69Q5SWH9 247 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 C6orf183Q5T699 404 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 FAHD2BQ6P2I3 314 aaPredicted RBP12.63□□□□□ -0.39
CCM2-215ENST00000482714 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 FAHD2AQ96GK7 314 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 WDFY2Q96P53 400 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
CCM2-215ENST00000482714 C7orf69Q9H7B7 122 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 AUNIPQ9H7T9 357 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 METTL8Q9H825 291 aaKnown RBP12.63□□□□□ -0.39
CCM2-215ENST00000482714 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
CCM2-215ENST00000482714 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
CCM2-215ENST00000482714 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
CCM2-215ENST00000482714 NPIPB11E5RHQ5 1161 aa12.62□□□□□ -0.39
CCM2-215ENST00000482714 DTYMKP23919 212 aa12.62□□□□□ -0.39
CCM2-215ENST00000482714 PRTN3P24158 256 aa12.62□□□□□ -0.39
CCM2-215ENST00000482714 ARF6P62330 175 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms