RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 RCC2Q9P258 522 aaKnown RBP23.52■■□□□ 1.36
CHKB-208ENST00000479003 NDRG3Q9UGV2 375 aa23.52■■□□□ 1.36
CHKB-208ENST00000479003 FAM96BQ9Y3D0 163 aa23.52■■□□□ 1.36
CHKB-208ENST00000479003 SVILO95425 2214 aa23.52■■□□□ 1.36
CHKB-208ENST00000479003 ARR3P36575 388 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 MCEMP1Q8IX19 187 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 Q9N2K0 584 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 NAPSAO96009 420 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 FBXW12Q6X9E4 464 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 BSCL2Q96G97 398 aaPredicted RBP23.51■■□□□ 1.35
CHKB-208ENST00000479003 POM121L2Q96KW2 1035 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 TP53RKQ96S44 253 aa23.51■■□□□ 1.35
CHKB-208ENST00000479003 ADAT1Q9BUB4 502 aaKnown RBP23.51■■□□□ 1.35
CHKB-208ENST00000479003 ZNF98A6NK75 572 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 MPPED1O15442 326 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 SNAPINO95295 136 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 P2RY1P47900 373 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 F2RL1P55085 397 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 LURAP1LQ8IV03 231 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 LYPD6BQ8NI32 183 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 ZDHHC8Q9ULC8 765 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 C3orf85A0A1B0GTC6 90 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 ZNF732B4DXR9 585 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 RNASEK-C17orf49H0YIS7 233 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 ST8SIA3O43173 380 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 RAB1AP62820 205 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 MPV17LQ2QL34 196 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 DHRS7BQ6IAN0 325 aaPredicted RBP23.5■■□□□ 1.35
CHKB-208ENST00000479003 Q6ZRG5 221 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 NUFIP2Q7Z417 695 aaKnown RBP23.5■■□□□ 1.35
CHKB-208ENST00000479003 HS3ST6Q96QI5 342 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 MTCH1Q9NZJ7 389 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 POMT1Q9Y6A1 747 aa23.5■■□□□ 1.35
CHKB-208ENST00000479003 CD5P06127 495 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 ID4P47928 161 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 KCNJ3P48549 501 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 TMPRSS3P57727 454 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 SRPXP78539 464 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 DPPA2Q7Z7J5 298 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 MKXQ8IYA7 352 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 SLC35G3Q8N808 338 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 OR4D5Q8NGN0 318 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 CLCF1Q9UBD9 225 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 ARID1AO14497 2285 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 MED12LQ86YW9 2145 aa23.49■■□□□ 1.35
CHKB-208ENST00000479003 PCP4L1A6NKN8 68 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 GLAP06280 429 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 GNRHRP30968 328 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 OR5A2Q8NGI9 324 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 OPA3Q9H6K4 179 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 ARHGAP21Q5T5U3 1957 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 ZZEF1O43149 2961 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 NGFP01138 241 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 HAGHLQ6PII5 290 aaPredicted RBP23.48■■□□□ 1.35
CHKB-208ENST00000479003 CLEC9AQ6UXN8 241 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 SARAFQ96BY9 339 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 TMEM222Q9H0R3 208 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 WFDC1Q9HC57 220 aa23.48■■□□□ 1.35
CHKB-208ENST00000479003 CHD8Q9HCK8 2581 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 BORCS7-ASMTA0A0B4J1R7 106 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 TRAPPC2LH3BP13 241 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 SEC11BP0C7V7 166 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 RND3P61587 244 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 TMEM88Q6PEY1 159 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 DMBX1Q8NFW5 382 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 GINS3Q9BRX5 216 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 FAM212BQ9NTI7 297 aaPredicted RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 RCL1Q9Y2P8 373 aaKnown RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 MAP1BP46821 2468 aaKnown RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 TRDCB7Z8K6 153 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 F12P00748 615 aaPredicted RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 SWI5Q1ZZU3 235 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 MEX3BQ6ZN04 569 aaKnown RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 TRIB1Q96RU8 372 aa23.47■■□□□ 1.35
CHKB-208ENST00000479003 ZNF71Q9NQZ8 489 aaPredicted RBP23.47■■□□□ 1.35
CHKB-208ENST00000479003 H7C2Y5 167 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 TK1P04183 234 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 PLP2Q04941 152 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 TMEM56Q96MV1 263 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 C12orf49Q9H741 205 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 IL36RNQ9UBH0 155 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 TMEM56-RWDD3S4R434 201 aa23.46■■□□□ 1.35
CHKB-208ENST00000479003 CD300LBA8K4G0 201 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 CDS2O95674 445 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 SCTP09683 121 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 NPBWR1P48145 328 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 P4HA3Q7Z4N8 544 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 HIST1H2AAQ96QV6 131 aa23.45■■□□□ 1.35
CHKB-208ENST00000479003 TBC1D26Q86UD7 250 aa23.45■■□□□ 1.34
CHKB-208ENST00000479003 USB1Q9BQ65 265 aaKnown RBP23.45■■□□□ 1.34
CHKB-208ENST00000479003 SFTA3P0C7M3 94 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 DVL1P1P54792 670 aaPredicted RBP23.44■■□□□ 1.34
CHKB-208ENST00000479003 HERPUD1Q15011 391 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 C5orf24Q7Z6I8 188 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 OR5P3Q8WZ94 311 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 C11orf1Q9H5F2 150 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 KIR2DS1A0A191URI9 304 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 SYNGR1O43759 233 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 TUSC2O75896 110 aa23.44■■□□□ 1.34
CHKB-208ENST00000479003 DANCRP0C864 163 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms