RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 C16orf82Q7Z2V1 217 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 SUMF2Q8NBJ7 301 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 DPCDQ9BVM2 203 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-215ENST00000478473 CALYQ9NYX4 217 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 ERGIC3Q9Y282 383 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 BUB1B-PAK6H3BSN5 160 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 F2RL2O00254 374 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 GTF2F2P13984 249 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 JUNBP17275 347 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-215ENST00000478473 PRRX1P54821 245 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 TMEM219Q86XT9 240 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 OR9G1Q8NH87 305 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 NRG4Q8WWG1 115 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 S100A13Q99584 98 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 ZNF581Q9P0T4 197 aa18.8■□□□□ 0.6
C9orf3-215ENST00000478473 RCC2Q9P258 522 aaKnown RBP18.8■□□□□ 0.6
C9orf3-215ENST00000478473 HSPB6O14558 160 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 GEMIN2O14893 280 aaKnown RBP18.79■□□□□ 0.6
C9orf3-215ENST00000478473 CEACAM3P40198 252 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 UTF1Q5T230 341 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 UNQ9370/PRO34162Q6UXP9 181 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 PRSS22Q9GZN4 317 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 WNT10AQ9GZT5 417 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 IDI2-AS1Q9NZ38 188 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 LSM2Q9Y333 95 aaKnown RBP18.79■□□□□ 0.6
C9orf3-215ENST00000478473 CMYA5Q8N3K9 4069 aa18.79■□□□□ 0.6
C9orf3-215ENST00000478473 OR7C1O76099 320 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-215ENST00000478473 GZMHP20718 246 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 BRS3P32247 399 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 GLP1RP43220 463 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 ARHGDIBP52566 201 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 C2orf68Q2NKX9 166 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 TPTE2P1Q5T6R2 138 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 Q6ZTK2 550 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 KLHDC1Q8N7A1 406 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 NKAIN3Q8N8D7 197 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 MND1Q9BWT6 205 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 MMP28Q9H239 520 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 LIN7BQ9HAP6 207 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 ING3Q9NXR8 418 aa18.78■□□□□ 0.6
C9orf3-215ENST00000478473 A0A1W2PP11 408 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 H3BUI4 141 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 TOR1AO14656 332 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 SERPINA2P20848 420 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 MAPK3P27361 379 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-215ENST00000478473 SLC35A2P78381 396 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 IRF3Q14653 427 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 SLC22A6Q4U2R8 563 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 GAPTQ8N292 157 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 MS4A15Q8N5U1 240 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 UQCC2Q9BRT2 126 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 DUSP21Q9H596 190 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 SPACA1Q9HBV2 294 aa18.77■□□□□ 0.6
C9orf3-215ENST00000478473 MRPS28Q9Y2Q9 187 aaKnown RBP18.77■□□□□ 0.6
C9orf3-215ENST00000478473 FAM90A10PA6NDY2 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A18PA6NE21 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A16PA6NEW6 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A20PA6NIJ5 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A7PA6NKC0 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A9PA6NNJ1 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A12PA8MX19 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A5PA8MXJ8 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A23PA8MXZ1 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 J3QR06 171 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A15PP0C7V4 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A13PP0C7W8 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A14PP0C7W9 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 FAM90A24PP0C7X0 464 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 CD37P11049 281 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 AQP4P55087 323 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 BLCAPP62952 87 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 GPR50Q13585 617 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 CCDC144NLQ6NUI1 221 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 OR52M1Q8NGK5 317 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 MRGPRDQ8TDS7 321 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 MYDGFQ969H8 173 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 MUL1Q969V5 352 aa18.76■□□□□ 0.59
C9orf3-215ENST00000478473 NOTCH1P46531 2555 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 PNMA8CA0A1B0GUJ8 204 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 A0A1W2PPK0 400 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 TMEM30CPA0ZSE6 113 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 FAM172BPA6NC97 362 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 C15orf65H3BRN8 121 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 WIPF1O43516 503 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 SC5DO75845 299 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 TSPAN15O95858 294 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 GP2P55259 537 aaKnown RBP18.75■□□□□ 0.59
C9orf3-215ENST00000478473 GABPB1Q06547 395 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-215ENST00000478473 SPHARQ15513 63 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 GLIPR1L1Q6UWM5 242 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 ZNF497Q6ZNH5 498 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 THNSL2Q86YJ6 484 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 OCSTAMPQ9BR26 566 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 SCN3BQ9NY72 215 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 GHRLQ9UBU3 117 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 PSG11Q9UQ72 335 aa18.75■□□□□ 0.59
C9orf3-215ENST00000478473 AMMECR1Q9Y4X0 333 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-215ENST00000478473 TET2Q6N021 2002 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-215ENST00000478473 ORC5O43913 435 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 MT-ND4P03905 459 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms