RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OPCMLQ14982 345 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 FBXL19-AS1Q494R0 122 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 FAM209AQ5JX71 171 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 C6orf183Q5T699 404 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 TEX261Q6UWH6 196 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ACP7Q6ZNF0 438 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ZNF497Q6ZNH5 498 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 C17orf107Q6ZR85 190 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 WDR86Q86TI4 376 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ZNF546Q86UE3 836 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 LGI3Q8N145 548 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 OR10J5Q8NHC4 309 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 TMEM171Q8WVE6 324 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 RTN4IP1Q8WWV3 396 aaPredicted RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 IL22RA2Q969J5 263 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ELMOD3Q96FG2 381 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 AKR1E2Q96JD6 320 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 DMRTA2Q96SC8 542 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 MFFQ9GZY8 342 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 METTL8Q9H825 291 aaKnown RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 PLSCR3Q9NRY6 295 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 ASF1BQ9NVP2 202 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 KCNIP1Q9NZI2 227 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 MAB21L2Q9Y586 359 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 U3KQ87 197 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 FXYD6-FXYD2A0A087WZ82 144 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 A0A1B0GW55 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 OOEPA6NGQ2 149 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SRRM5B3KS81 715 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 HS3ST1O14792 307 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 ATP6V1G1O75348 118 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 RP2O75695 350 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 RLN2P04090 185 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 FAM87AP0C7U9 286 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L2P0CJ85 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L3P0CJ86 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L4P0CJ87 422 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L5P0CJ88 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L6P0CJ89 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4L7P0CJ90 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 LYL1P12980 280 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SERPINF1P36955 418 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 CA7P43166 264 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 ASCL1P50553 236 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 AP2S1P53680 142 aaPredicted RBP6.71□□□□□ -1.34
VMA21-203ENST00000477649 RAB14P61106 215 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SORDQ00796 357 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 FAM27E3Q08E93 113 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 HMGN3Q15651 99 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 C2orf68Q2NKX9 166 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 ALKBH6Q3KRA9 238 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 Q5BKY6 102 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DCAF12L2Q5VW00 463 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 BRICD5Q6PL45 260 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 WDR82Q6UXN9 313 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 Q6ZR03 302 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 ACOT7LQ6ZUV0 252 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SLC51BQ86UW2 128 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 C11orf53Q8IXP5 236 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 RPRMLQ8N4K4 120 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
VMA21-203ENST00000477649 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 OR5T2Q8NGG2 359 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 OR8H1Q8NGG4 311 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 PPP1R1CQ8WVI7 109 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 RDH5Q92781 318 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 MRPL24Q96A35 216 aaKnown RBP6.71□□□□□ -1.34
VMA21-203ENST00000477649 ABHD14BQ96IU4 210 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SPIN2AQ99865 258 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SPIN2BQ9BPZ2 258 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SPOCK3Q9BQ16 436 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 TOLLIPQ9H0E2 274 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 FXYD6Q9H0Q3 95 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 SLC2A9Q9NRM0 540 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DNAJB11Q9UBS4 358 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUX4Q9UBX2 424 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 IL19Q9UHD0 177 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 UBQLN2Q9UHD9 624 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 TRAPPC2LQ9UL33 140 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 OR2W1Q9Y3N9 320 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 TMED3Q9Y3Q3 217 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 BAHCC1Q9P281 2608 aa6.71□□□□□ -1.34
VMA21-203ENST00000477649 RTTNQ86VV8 2226 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 LAMA5O15230 3695 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 KANTRA0A1W2PQU2 76 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 hCG_1807616A0A1W2PRN6 198 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 FAM221AA4D161 298 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 RNF212BA8MTL3 300 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 FAM25EA8MYX2 175 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 MPPED1O15442 326 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 ARPC5O15511 151 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SIAH2O43255 324 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SIX6O95475 246 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 MPC2O95563 127 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 CD55P08174 381 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TNFRSF1AP19438 455 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms