RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 RDH5Q92781 318 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 TAAR3PQ9P1P4 343 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 ZNF835Q9Y2P0 537 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 TAAR5O14804 337 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 GRPP07492 148 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 HOXB5P09067 269 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 OR5AC1P0C628 307 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 DUSP1P28562 367 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 CFHR2P36980 270 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 SELENOVP59797 346 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 PAX5Q02548 391 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 ALKBH6Q3KRA9 238 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 STOML3Q8TAV4 291 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 ST8SIA2Q92186 375 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 IL22RA2Q969J5 263 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 RNF126Q9BV68 326 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 MBNL3Q9NUK0 354 aaKnown RBP18.44■□□□□ 0.54
CCM2-206ENST00000474617 CUL9Q8IWT3 2517 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 BET1O15155 118 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 HAND1O96004 215 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 SCTP09683 121 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 GGNBP1Q5YKI7 109 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 LRRC20Q8TCA0 184 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 C18orf12Q96KH6 178 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 OR10C1Q96KK4 312 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 SPIN2AQ99865 258 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 SPIN2BQ9BPZ2 258 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 OR2W1Q9Y3N9 320 aa18.43■□□□□ 0.54
CCM2-206ENST00000474617 PTPRZ1P23471 2315 aaPredicted RBP18.42■□□□□ 0.54
CCM2-206ENST00000474617 C3orf85A0A1B0GTC6 90 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 TMEM30CPA0ZSE6 113 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 RRASP10301 218 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 GNRHRP30968 328 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 FABP6P51161 128 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 NKX6-1P78426 367 aaPredicted RBP18.42■□□□□ 0.54
CCM2-206ENST00000474617 SLC35E4Q6ICL7 350 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 DOLPP1Q86YN1 238 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 H1FOOQ8IZA3 346 aaPredicted RBP18.42■□□□□ 0.54
CCM2-206ENST00000474617 MSI2Q96DH6 328 aaKnown RBP18.42■□□□□ 0.54
CCM2-206ENST00000474617 ABHD14BQ96IU4 210 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 AKR1E2Q96JD6 320 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 TMEM56Q96MV1 263 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 CNTNAP3BQ96NU0 1288 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 CNTNAP3Q9BZ76 1288 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 SLC5A7Q9GZV3 580 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 TMEM222Q9H0R3 208 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 TMEM56-RWDD3S4R434 201 aa18.42■□□□□ 0.54
CCM2-206ENST00000474617 HSPB6O14558 160 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 CDS2O95674 445 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 KLF3P57682 345 aaPredicted RBP18.41■□□□□ 0.54
CCM2-206ENST00000474617 HERPUD1Q15011 391 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 PHLDA2Q53GA4 152 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 TRAT1Q6PIZ9 186 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 PCSK4Q6UW60 755 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 GFRALQ6UXV0 394 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 ACP7Q6ZNF0 438 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 C11orf53Q8IXP5 236 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 Q8NA96 180 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 FAM216AQ8WUB2 273 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 KCNIP1Q9NZI2 227 aa18.41■□□□□ 0.54
CCM2-206ENST00000474617 LEUTXA8MZ59 168 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 H0YL77 283 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 M0R1B8 84 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 ZNF83P51522 516 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 WDR82Q6UXN9 313 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 BVESQ8NE79 360 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 GLYATL2Q8WU03 294 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 SHARPINQ9H0F6 387 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 PLEKHA2Q9HB19 425 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 TRAPPC2LQ9UL33 140 aa18.4■□□□□ 0.54
CCM2-206ENST00000474617 IGLV3-9A0A075B6K5 115 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 A6NLC8 198 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 F5H0A9 414 aaPredicted RBP18.39■□□□□ 0.54
CCM2-206ENST00000474617 SIRPB1O00241 398 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 PHF1O43189 567 aaPredicted RBP18.39■□□□□ 0.54
CCM2-206ENST00000474617 TPT1P13693 172 aaKnown RBP18.39■□□□□ 0.54
CCM2-206ENST00000474617 RAB32Q13637 225 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 ATXN7L3Q14CW9 347 aaPredicted RBP18.39■□□□□ 0.54
CCM2-206ENST00000474617 HMGN3Q15651 99 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 MSMO1Q15800 293 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 Q6ZR03 302 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 PDZD9Q8IXQ8 264 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 ZNF471Q9BX82 626 aaPredicted RBP18.39■□□□□ 0.54
CCM2-206ENST00000474617 GSKIPQ9P0R6 139 aa18.39■□□□□ 0.54
CCM2-206ENST00000474617 IGKV1-6A0A0C4DH72 117 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 H0Y980 276 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 DEDDO75618 318 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 SPINK2P20155 84 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 NUP37Q8NFH4 326 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 SECTM1Q8WVN6 248 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 LUZP4Q9P127 313 aa18.39■□□□□ 0.53
CCM2-206ENST00000474617 E5RGE8 158 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 H0YIZ8 118 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 C16orf97H3BN30 126 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.38■□□□□ 0.53
CCM2-206ENST00000474617 SPDEFO95238 335 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 C6orf183Q5T699 404 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 EIF5AL1Q6IS14 154 aaKnown RBP18.38■□□□□ 0.53
CCM2-206ENST00000474617 TMEM108Q6UXF1 575 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 C20orf204Q6ZNR8 217 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms