RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 REC114Q7Z4M0 266 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF383Q8NA42 475 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 KCNE4Q8WWG9 221 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 EXTL1Q92935 676 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 GLRX2Q9NS18 164 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 SLC7A11Q9UPY5 501 aa9.39□□□□□ -0.91
C9orf3-214ENST00000473778 TNRC6AQ8NDV7 1962 aaKnown RBP9.39□□□□□ -0.91
C9orf3-214ENST00000473778 MED13Q9UHV7 2174 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 CCDC163A0A0D9SF12 145 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 hCG_1809904A0A1W2PP81 198 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 A0A1W2PR64 198 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 A0A1W2PRV1 198 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF724A8MTY0 619 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 CDRT15L2A8MXV6 281 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 PROB1E7EW31 1015 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 PRH1P02810 166 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 GPM6AP51674 278 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 CASP6P55212 293 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 IGFBP7Q16270 282 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 C20orf204Q6ZNR8 217 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 PSMF1Q92530 271 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 RGCCQ9H4X1 137 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 MTCH1Q9NZJ7 389 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 LUZP4Q9P127 313 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 TMED3Q9Y3Q3 217 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 MED12LQ86YW9 2145 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 DSPP15924 2871 aaKnown RBP9.38□□□□□ -0.91
C9orf3-214ENST00000473778 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 CYTIPO60759 359 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 LILRA1O75019 489 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 NAPSAO96009 420 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 HLA-HP01893 362 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 GDF1P27539 372 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 RAB4BP61018 213 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 HERV-K104P61576 105 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 GAPTQ8N292 157 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM105Q8N8V8 129 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 Q8NFD4 153 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 SYT3Q9BQG1 590 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 HES7Q9BYE0 225 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 PARPBPQ9NWS1 579 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 GFOD1Q9NXC2 390 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
C9orf3-214ENST00000473778 DIDO1Q9BTC0 2240 aaKnown RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 BORCS7-ASMTA0A0B4J1R7 106 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 A0A1W2PPE2 198 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SLC22A20A6NK97 555 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 RPL36A-HNRNPH2H7BZ11 118 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 NGFP01138 241 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 TDGF1P13385 188 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ATP6V0CP27449 155 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 GLP1RP43220 463 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SRYQ05066 204 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SELENOHQ8IZQ5 122 aaKnown RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 FAM213BQ8TBF2 198 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 PLPPR1Q8TBJ4 325 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SIGLEC12Q96PQ1 595 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 NEU1Q99519 415 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 PRDM14Q9GZV8 571 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF552Q9H707 407 aaPredicted RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 Q9N2K0 584 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 M0R036 132 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ADAM20O43506 726 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 TNFSF12O43508 249 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SYNGR1O43759 233 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SSSCA1O60232 199 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ARF1P84077 181 aaKnown RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 PRDX4Q13162 271 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ZFP62Q8NB50 900 aaPredicted RBP9.37□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF488Q96MN9 340 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM56Q96MV1 263 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM56-RWDD3S4R434 201 aa9.37□□□□□ -0.91
C9orf3-214ENST00000473778 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 CST7O76096 145 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 COX5BP10606 129 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 SULT1A1P50225 295 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 RUNX1Q01196 453 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 HAGHQ16775 308 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 PYY3Q5JQD4 70 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 KRBOX4Q5JUW0 171 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM252Q8N6L7 170 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 S100PBPQ96BU1 408 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 CCL28Q9NRJ3 127 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms