RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PARP12Q9H0J9 701 aaKnown RBP5.25□□□□□ -1.57
CLK1-210ENST00000473565 SPEF1Q9Y4P9 236 aa5.25□□□□□ -1.57
CLK1-210ENST00000473565 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.24□□□□□ -1.57
CLK1-210ENST00000473565 TNFSF12O43508 249 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 MPC2O95563 127 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 PPYP01298 95 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 GLP1RP43220 463 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 TAS2R31P59538 309 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 HERV-K104P61576 105 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 ZNF146Q15072 292 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 BEX5Q5H9J7 111 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 PPP1R1CQ8WVI7 109 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 OR10C1Q96KK4 312 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 VKORC1Q9BQB6 163 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 SPACA1Q9HBV2 294 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 TUBD1Q9UJT1 453 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 ATP23Q9Y6H3 246 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 EPG5Q9HCE0 2579 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 DYSFO75923 2080 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 MAP1AP78559 2803 aaPredicted RBP5.24□□□□□ -1.57
CLK1-210ENST00000473565 DBX1A6NMT0 343 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 TRDCB7Z8K6 153 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 HSD17B6O14756 317 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 SH2D1BO14796 132 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 CFDP00746 253 aaPredicted RBP5.24□□□□□ -1.57
CLK1-210ENST00000473565 CTSDP07339 412 aaPredicted RBP5.24□□□□□ -1.57
CLK1-210ENST00000473565 OR5AC1P0C628 307 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 SELLP14151 372 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 COL10A1Q03692 680 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 ABCA11PQ4W5N1 156 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 TMEM108Q6UXF1 575 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 Q8IYB0 196 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 GCSAMQ8N6F7 178 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 OR8H1Q8NGG4 311 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 MOB3AQ96BX8 217 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 MEGF10Q96KG7 1140 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 HEXA-AS1Q9H8Q6 139 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 HES4Q9HCC6 221 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 SLC2A9Q9NRM0 540 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 ELOVL5Q9NYP7 299 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 KIF25Q9UIL4 384 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 TRAPPC2LQ9UL33 140 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 MYO18BQ8IUG5 2567 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 ARFGEF3Q5TH69 2177 aa5.24□□□□□ -1.57
CLK1-210ENST00000473565 IGLV3-9A0A075B6K5 115 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 A0A1B0GW55 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RGS13O14921 159 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L2P0CJ85 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L3P0CJ86 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L4P0CJ87 422 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L5P0CJ88 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L6P0CJ89 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L7P0CJ90 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CD80P33681 288 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CA7P43166 264 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 GABRA2P47869 451 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 HLA-DRB3P79483 266 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CCL8P80075 99 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RBM39Q14498 530 aaKnown RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 EDDM3AQ14507 147 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 SPIN3Q5JUX0 258 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 FAHD2BQ6P2I3 314 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4L9Q6RFH8 374 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 PCSK4Q6UW60 755 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 LINC00596Q86U02 117 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 FOXRED2Q8IWF2 684 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CD177Q8N6Q3 437 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DEFB108BQ8NET1 73 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RTN4IP1Q8WWV3 396 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 FAHD2AQ96GK7 314 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 SCGB3A2Q96PL1 93 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TLNRD1Q9H1K6 362 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CLEC4MQ9H2X3 399 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 METTL8Q9H825 291 aaKnown RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 CCL28Q9NRJ3 127 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 GSKIPQ9P0R6 139 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DUX4Q9UBX2 424 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 USF3Q68DE3 2245 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RAI1Q7Z5J4 1906 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 CRYM-AS1A6NIL9 109 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RGS11O94810 467 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CYB5R3P00387 301 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 PLAUP00749 431 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 IFNA2P01563 188 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 IGHV1-46P01743 117 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TK1P04183 234 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 OR4A8P0C604 315 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 GNRHRP30968 328 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 GLIPR1P48060 266 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ADORA2A-AS1P86434 159 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ADIPOQQ15848 244 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ZNF497Q6ZNH5 498 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ZNF818PQ6ZRF7 136 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 SGPP2Q8IWX5 399 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 GAPTQ8N292 157 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 OR1L1Q8NH94 360 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 MRPL24Q96A35 216 aaKnown RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 PLPPR2Q96GM1 343 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 COQ2Q96H96 371 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TRAF4Q9BUZ4 470 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms