RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TM4SF18Q96CE8 201 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 BIRC8Q96P09 236 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 CLCC1Q96S66 551 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 ZNF382Q96SR6 550 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 SIGMAR1Q99720 223 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 GINS3Q9BRX5 216 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 FAIM2Q9BWQ8 316 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 OSBPL11Q9BXB4 747 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 TBL1XR1Q9BZK7 514 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 POLR2J2Q9GZM3 115 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 POLR2J3Q9H1A7 115 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 MAP1LC3AQ9H492 121 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 RPF2Q9H7B2 306 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 NHEJ1Q9H9Q4 299 aaPredicted RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 RETNQ9HD89 108 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 FGF20Q9NP95 211 aaPredicted RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 MCUBQ9NWR8 336 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 SPANXCQ9NY87 97 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 B3GNT2Q9NY97 397 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 PRO0628Q9UI54 55 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 GNPTGQ9UJJ9 305 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 GNG8Q9UK08 70 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 C14orf166Q9Y224 244 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 TP53TG1Q9Y2A0 90 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 NEUROG3Q9Y4Z2 214 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 RBM7Q9Y580 266 aaKnown RBP2.34□□□□□ -2.03
CD46-213ENST00000471987 SETBP1Q9Y6X0 1596 aa2.34□□□□□ -2.03
CD46-213ENST00000471987 COL22A1Q8NFW1 1626 aaPredicted RBP2.34□□□□□ -2.04
CD46-213ENST00000471987 PDS5BQ9NTI5 1447 aa2.34□□□□□ -2.04
CD46-213ENST00000471987 CACNA1AO00555 2505 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 LINC00862A6NCI5 91 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 G3V4G9 280 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 H3BSA7 217 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 TAAR5O14804 337 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ENSAO43768 121 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 ORC5O43913 435 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 FAM189A1O60320 539 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 SLC22A5O76082 557 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 PTTG1O95997 202 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CSF3P09919 207 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CYBAP13498 195 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 NELFEP18615 380 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 TAC1P20366 129 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 DDTP30046 118 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 S100A7P31151 101 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 FMO3P31513 532 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 GGT2P36268 569 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 KIR2DS4P43632 304 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 LGALS7P47929 136 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 AQP5P55064 265 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 TCL1AP56279 114 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 SELENOTP62341 195 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 PAFAH1B2P68402 229 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 MRPS10P82664 201 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 EMX1Q04741 257 aaPredicted RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 TCP10Q12799 353 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 FAM53BQ14153 422 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CDK10Q15131 360 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 RSU1Q15404 277 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 SNRNP35Q16560 246 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 HSD17B12Q53GQ0 312 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ACSBG2Q5FVE4 666 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 TMEM78Q5T7P6 136 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CPTPQ5TA50 214 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 XKRXQ6PP77 449 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 TMPPEQ6ZT21 453 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 SLC16A13Q7RTY0 426 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CA13Q8N1Q1 262 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ZNF439Q8NDP4 499 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 DUSP18Q8NEJ0 188 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 OR2T33Q8NG76 320 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 OR5J2Q8NH18 312 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 OR5B3Q8NH48 314 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 DOK4Q8TEW6 326 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 AENQ8WTP8 325 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 FAM151AQ8WW52 585 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CHCHD10Q8WYQ3 142 aaPredicted RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 RPUSD4Q96CM3 377 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 SEH1LQ96EE3 360 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CMTM7Q96FZ5 175 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 MRAP2Q96G30 205 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 SMARCD1Q96GM5 515 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 NARS2Q96I59 477 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 ZNF488Q96MN9 340 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CMSS1Q9BQ75 279 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 RIOK2Q9BVS4 552 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 SRXN1Q9BYN0 137 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ZNF385DQ9H6B1 395 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ACP6Q9NPH0 428 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CALML5Q9NZT1 146 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 BAIAP2Q9UQB8 552 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 ASF1AQ9Y294 204 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 AK6Q9Y3D8 172 aaKnown RBP2.33□□□□□ -2.04
CD46-213ENST00000471987 SNX10Q9Y5X0 201 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 PSME4Q14997 1843 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 FMN1Q68DA7 1419 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 CEP164Q9UPV0 1460 aa2.33□□□□□ -2.04
CD46-213ENST00000471987 MYH3P11055 1940 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 AKAP11Q9UKA4 1901 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms