RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CDS2O95674 445 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 OR2H2O95918 312 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 RLN2P04090 185 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 GLI4P10075 376 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 S100GP29377 79 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 GNRHRP30968 328 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 NUP62P37198 522 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 MPV17P39210 176 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 RPS23P62266 143 aaKnown RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 EIF5AP63241 154 aaKnown RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 NKX6-1P78426 367 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 HLA-DRB3P79483 266 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 HERPUD1Q15011 391 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 TBR1Q16650 682 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 SLC35E4Q6ICL7 350 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 RGS7BPQ6MZT1 257 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 MRGPRGQ86SM5 289 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 CMTM1Q8IZ96 169 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 CLEC18CQ8NCF0 446 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 NAXEQ8NCW5 288 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 BVESQ8NE79 360 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ANGPTL6Q8NI99 470 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 GLYATL2Q8WU03 294 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 DYRK2Q92630 601 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 MUCL1Q96DR8 90 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 KIRREL1Q96J84 757 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 AKR1E2Q96JD6 320 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 OR10C1Q96KK4 312 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 CNTNAP3BQ96NU0 1288 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 CNTNAP3Q9BZ76 1288 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 SHARPINQ9H0F6 387 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM222Q9H0R3 208 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 NCOR1P1Q9H4R4 102 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 PLEKHA2Q9HB19 425 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 RDH8Q9NYR8 311 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 JKAMPQ9P055 326 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 MBD2Q9UBB5 411 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 FBXO9Q9UK97 447 aaPredicted RBP6.45□□□□□ -1.38
COL6A3-208ENST00000468792 OR2W1Q9Y3N9 320 aa6.45□□□□□ -1.38
COL6A3-208ENST00000468792 DMXL2Q8TDJ6 3036 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 IGKV1-6A0A0C4DH72 117 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 C3orf85A0A1B0GTC6 90 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 A0A1W2PR80 420 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 FAM221AA4D161 298 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 K7EM74 188 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 CDIPTO14735 213 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 TIMM8AO60220 97 aaPredicted RBP6.44□□□□□ -1.38
COL6A3-208ENST00000468792 AGFG2O95081 481 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 NXPH2O95156 264 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 CRYAAP02489 173 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 HEXAP06865 529 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 NMBP08949 121 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 SCTP09683 121 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 OR5AC1P0C628 307 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 SLC25A6P12236 298 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF44P15621 663 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 UCP1P25874 307 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 DUSP1P28562 367 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 GATA4P43694 442 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ERVS71-1P61550 626 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 PDCD1Q15116 288 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 HMGN3Q15651 99 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 TSC22D1Q15714 1073 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 IAH1Q2TAA2 248 aaPredicted RBP6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ALKBH6Q3KRA9 238 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 PAN3Q58A45 887 aaKnown RBP6.44□□□□□ -1.38
COL6A3-208ENST00000468792 IGSF11Q5DX21 431 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 GPR157Q5UAW9 335 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 GGNBP1Q5YKI7 109 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 H1FOOQ8IZA3 346 aaPredicted RBP6.44□□□□□ -1.38
COL6A3-208ENST00000468792 FAM71E2Q8N5Q1 922 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF565Q8N9K5 539 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 Q8NA96 180 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ZBTB34Q8NCN2 500 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 NUP37Q8NFH4 326 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 OR10J5Q8NHC4 309 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 TOMM40LQ969M1 308 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 ERGIC1Q969X5 290 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 SPIN2AQ99865 258 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 SPIN2BQ9BPZ2 258 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 OR51B6Q9H340 312 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 FAM212BQ9NTI7 297 aaPredicted RBP6.44□□□□□ -1.38
COL6A3-208ENST00000468792 TAAR3PQ9P1P4 343 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 IL36RNQ9UBH0 155 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 APC2O95996 2303 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 CEP295Q9C0D2 2601 aa6.44□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM30CPA0ZSE6 113 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 E5RGE8 158 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 H0Y980 276 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 HS3ST1O14792 307 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 DEDDO75618 318 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 HAND1O96004 215 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 GAPDHP04406 335 aaKnown RBP6.43□□□□□ -1.38
COL6A3-208ENST00000468792 HOXB5P09067 269 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 TPT1P13693 172 aaKnown RBP6.43□□□□□ -1.38
COL6A3-208ENST00000468792 MMP9P14780 707 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms