RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 BRICD5Q6PL45 260 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 METAP1DQ6UB28 335 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-205ENST00000466897 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 ZNF554Q86TJ5 538 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 OR4M2Q8NGB6 313 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 FAAP24Q9BTP7 215 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 WNK2Q9Y3S1 2297 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 UBE2QL1A1L167 161 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 M0R1W7 72 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 RGS5O15539 181 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 TGFAP01135 160 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 MT-ND4P03905 459 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-205ENST00000466897 PITPNAQ00169 270 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 PAX8Q06710 450 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 HACD4Q5VWC8 232 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 TMEM200BQ69YZ2 307 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 C1orf122Q6ZSJ8 110 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 TCF23Q7RTU1 214 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 LAX1Q8IWV1 398 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 OR4M1Q8NGD0 313 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 C6orf62Q9GZU0 229 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-205ENST00000466897 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 MMP26Q9NRE1 261 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.41
NPHP4-205ENST00000466897 HIF1ANQ9NWT6 349 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 RABL2AQ9UBK7 228 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-205ENST00000466897 OPN4Q9UHM6 478 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 AK3Q9UIJ7 227 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 KIF25Q9UIL4 384 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 RABL2BQ9UNT1 228 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 KPTNQ9Y664 436 aa12.52□□□□□ -0.41
NPHP4-205ENST00000466897 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 A0A1W2PQ09 198 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 CTDSP2O14595 271 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 CLPXO76031 633 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 CGB3P0DN86 165 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 CGB7P0DN87 165 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 GNB3P16520 340 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 CDNFQ49AH0 187 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 BAIAP2L2Q6UXY1 529 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 MOB1BQ7L9L4 216 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 RTN4RL2Q86UN3 420 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 MRPL30Q8TCC3 161 aaKnown RBP12.51□□□□□ -0.41
NPHP4-205ENST00000466897 C15orf40Q8WUR7 153 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 DYRK2Q92630 601 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
NPHP4-205ENST00000466897 MGAT4AQ9UM21 535 aa12.51□□□□□ -0.41
NPHP4-205ENST00000466897 TRAV18A0A075B6X5 111 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 A0A1W2PR64 198 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF729A6NN14 1252 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-205ENST00000466897 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 GZMHP20718 246 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 TALDO1P37837 337 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 DLX6P56179 175 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 TAS2R20P59543 309 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF273Q14593 569 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
NPHP4-205ENST00000466897 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 C6orf183Q5T699 404 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 LINC00299Q6ZSB3 139 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 ZNF714Q96N38 554 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
NPHP4-205ENST00000466897 GAL3ST2Q9H3Q3 398 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 HIVEP1P15822 2718 aa12.5□□□□□ -0.41
NPHP4-205ENST00000466897 ACANP16112 2415 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 TMEM235A6NFC5 223 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 ORC5O43913 435 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 CD3GP09693 182 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 MMP9P14780 707 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 DTYMKP23919 212 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 S100A5P33763 92 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 MRPS15P82914 257 aaKnown RBP12.49□□□□□ -0.41
NPHP4-205ENST00000466897 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 Q6ZS49 121 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 C11orf42Q8N5U0 333 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 OR10A7Q8NGE5 316 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
NPHP4-205ENST00000466897 CYYR1Q96J86 154 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms