RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 TUSC2O75896 110 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 FHITP49789 147 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 F2RL1P55085 397 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 POLR2GP62487 172 aaKnown RBP eCLIP7.63□□□□□ -1.19
SYNE1-217ENST00000466159 SWI5Q1ZZU3 235 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 PCSK4Q6UW60 755 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF573Q86YE8 665 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 SELENOHQ8IZQ5 122 aaKnown RBP7.63□□□□□ -1.19
SYNE1-217ENST00000466159 FAM185AQ8N0U4 392 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 FAM58AQ8N1B3 248 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 LILRB1Q8NHL6 650 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM56Q96MV1 263 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 OPA3Q9H6K4 179 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM9BQ9NQ34 198 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 MPC1Q9Y5U8 109 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM56-RWDD3S4R434 201 aa7.63□□□□□ -1.19
SYNE1-217ENST00000466159 KIR2DS1A0A191URI9 304 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 FAM24AA6NFZ4 105 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 C1QL1O75973 258 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 CD5P06127 495 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 KIR2DS4P43632 304 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 GNMTQ14749 295 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 KIR2DS1Q14954 304 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 CXorf66Q5JRM2 361 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 HSD17B11Q8NBQ5 300 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 MAGT1Q9H0U3 335 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 OR51I2Q9H344 312 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 GP6Q9HCN6 339 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 FAM212BQ9NTI7 297 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 ZFP57Q9NU63 452 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 TRAV39A0A0B4J263 110 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 IGHV3-64DA0A0J9YX35 117 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 MED19A0JLT2 244 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 OR5B21A6NL26 309 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SLC33A1O00400 549 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 ADAM20O43506 726 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 WISP2O76076 250 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 NXPH3O95157 252 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SNAPINO95295 136 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 CDS2O95674 445 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF806P0C7X5 589 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 NFYBP25208 207 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 NKX2-1P43699 371 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 RND3P61587 244 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SRPXP78539 464 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 EWSR1Q01844 656 aaKnown RBP eCLIP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 IL24Q13007 206 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SRSF6Q13247 344 aaKnown RBP7.62□□□□□ -1.19
SYNE1-217ENST00000466159 GCNT2Q8N0V5 402 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 SPAG16Q8N0X2 631 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 LYPD6BQ8NI32 183 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 BOD1Q96IK1 185 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 GINS3Q9BRX5 216 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 PLK3Q9H4B4 646 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 C11orf1Q9H5F2 150 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 DLL3Q9NYJ7 618 aa7.62□□□□□ -1.19
SYNE1-217ENST00000466159 PRR14LQ5THK1 2151 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 SEC11BP0C7V7 166 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 DANCRP0C864 163 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 SPP1P10451 314 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF44P15621 663 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 OMGP23515 440 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 ERVS71-1P61550 626 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF616Q08AN1 781 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 TRIP6Q15654 476 aaKnown RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 MIDNQ504T8 468 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 WDR86Q86TI4 376 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 OR2C3Q8N628 320 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 ZDHHC11Q9H8X9 412 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 SPACA1Q9HBV2 294 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 RFNGQ9Y644 331 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 KIAA2026Q5HYC2 2103 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 IGSF23A1L1A6 192 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 FAM157AC9JC47 383 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 SSSCA1O60232 199 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 PGLYRP1O75594 196 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 TSPAN15O95858 294 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 CTXN2P0C2S0 81 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 UCP1P25874 307 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 IDH3GP51553 393 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 GTF3C1Q12789 2109 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 CLINT1Q14677 625 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 ALKBH6Q3KRA9 238 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 FAM76BQ5HYJ3 339 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 DHRS7BQ6IAN0 325 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 LINC00596Q86U02 117 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 IL1F10Q8WWZ1 152 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 KIRREL1Q96J84 757 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 OR2J1Q9GZK6 312 aa7.61□□□□□ -1.19
SYNE1-217ENST00000466159 DSPP15924 2871 aaKnown RBP7.61□□□□□ -1.19
SYNE1-217ENST00000466159 CACNA1HO95180 2353 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 DEGS1O15121 323 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 NKX2-8O15522 239 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 LYZL6O75951 148 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF14P17017 642 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 IGHV1-2P23083 117 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 CAMLGP49069 296 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms