RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SUMO1P63165 101 aaKnown RBP7.08□□□□□ -1.28
APP-213ENST00000464867 EWSR1Q01844 656 aaKnown RBP eCLIP7.08□□□□□ -1.28
APP-213ENST00000464867 ZNF91Q05481 1191 aa7.08□□□□□ -1.28
APP-213ENST00000464867 RBMY1FQ15415 496 aaKnown RBP7.08□□□□□ -1.28
APP-213ENST00000464867 KRBOX4Q5JUW0 171 aa7.08□□□□□ -1.28
APP-213ENST00000464867 PYHIN1Q6K0P9 492 aa7.08□□□□□ -1.28
APP-213ENST00000464867 RPL13AP3Q6NVV1 102 aa7.08□□□□□ -1.28
APP-213ENST00000464867 SLC16A12Q6ZSM3 486 aa7.08□□□□□ -1.28
APP-213ENST00000464867 RDH10Q8IZV5 341 aa7.08□□□□□ -1.28
APP-213ENST00000464867 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
APP-213ENST00000464867 AMELYQ99218 206 aa7.08□□□□□ -1.28
APP-213ENST00000464867 EBF4Q9BQW3 602 aa7.08□□□□□ -1.28
APP-213ENST00000464867 GPR84Q9NQS5 396 aa7.08□□□□□ -1.28
APP-213ENST00000464867 FBXO7Q9Y3I1 522 aa7.08□□□□□ -1.28
APP-213ENST00000464867 FAM220BPB1ANY3 271 aa7.07□□□□□ -1.28
APP-213ENST00000464867 E2F6O75461 281 aa7.07□□□□□ -1.28
APP-213ENST00000464867 DHRS3O75911 302 aa7.07□□□□□ -1.28
APP-213ENST00000464867 CDK2AP2O75956 126 aa7.07□□□□□ -1.28
APP-213ENST00000464867 IL3RAP26951 378 aa7.07□□□□□ -1.28
APP-213ENST00000464867 C21orf33P30042 268 aaPredicted RBP7.07□□□□□ -1.28
APP-213ENST00000464867 F2RL1P55085 397 aa7.07□□□□□ -1.28
APP-213ENST00000464867 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
APP-213ENST00000464867 SMIM11AP58511 58 aa7.07□□□□□ -1.28
APP-213ENST00000464867 ZNF45Q02386 682 aa7.07□□□□□ -1.28
APP-213ENST00000464867 C17orf58Q2M2W7 97 aa7.07□□□□□ -1.28
APP-213ENST00000464867 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
APP-213ENST00000464867 UTF1Q5T230 341 aa7.07□□□□□ -1.28
APP-213ENST00000464867 SLC25A26Q70HW3 274 aa7.07□□□□□ -1.28
APP-213ENST00000464867 TRPM8Q7Z2W7 1104 aa7.07□□□□□ -1.28
APP-213ENST00000464867 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
APP-213ENST00000464867 FAM58AQ8N1B3 248 aa7.07□□□□□ -1.28
APP-213ENST00000464867 YIPF7Q8N8F6 280 aa7.07□□□□□ -1.28
APP-213ENST00000464867 MINDY2Q8NBR6 621 aa7.07□□□□□ -1.28
APP-213ENST00000464867 OR2K2Q8NGT1 345 aa7.07□□□□□ -1.28
APP-213ENST00000464867 OR51E1Q8TCB6 317 aa7.07□□□□□ -1.28
APP-213ENST00000464867 C2CD4CQ8TF44 421 aa7.07□□□□□ -1.28
APP-213ENST00000464867 TMEM109Q9BVC6 243 aa7.07□□□□□ -1.28
APP-213ENST00000464867 GGTLC1Q9BX51 225 aa7.07□□□□□ -1.28
APP-213ENST00000464867 CADM1Q9BY67 442 aaKnown RBP7.07□□□□□ -1.28
APP-213ENST00000464867 EXOSC4Q9NPD3 245 aaKnown RBP7.07□□□□□ -1.28
APP-213ENST00000464867 FOXA2Q9Y261 457 aaPredicted RBP7.07□□□□□ -1.28
APP-213ENST00000464867 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
APP-213ENST00000464867 LOC102724200A0A096LPH7 203 aaPredicted RBP7.06□□□□□ -1.28
APP-213ENST00000464867 TMEM269A0A1B0GVZ9 245 aa7.06□□□□□ -1.28
APP-213ENST00000464867 IZUMO1RA6ND01 250 aa7.06□□□□□ -1.28
APP-213ENST00000464867 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
APP-213ENST00000464867 GSTA4O15217 222 aa7.06□□□□□ -1.28
APP-213ENST00000464867 MAGEB3O15480 346 aa7.06□□□□□ -1.28
APP-213ENST00000464867 IFNGP01579 166 aa7.06□□□□□ -1.28
APP-213ENST00000464867 PRKACAP17612 351 aa7.06□□□□□ -1.28
APP-213ENST00000464867 NUDT2P50583 147 aa7.06□□□□□ -1.28
APP-213ENST00000464867 TPPP2P59282 170 aa7.06□□□□□ -1.28
APP-213ENST00000464867 TMEM267Q0VDI3 215 aaPredicted RBP7.06□□□□□ -1.28
APP-213ENST00000464867 KLF10Q13118 480 aa7.06□□□□□ -1.28
APP-213ENST00000464867 APOFQ13790 326 aa7.06□□□□□ -1.28
APP-213ENST00000464867 CRMP1Q14194 572 aa7.06□□□□□ -1.28
APP-213ENST00000464867 ZNF146Q15072 292 aa7.06□□□□□ -1.28
APP-213ENST00000464867 LTC4SQ16873 150 aa7.06□□□□□ -1.28
APP-213ENST00000464867 ECSCRQ19T08 205 aa7.06□□□□□ -1.28
APP-213ENST00000464867 TMEM177Q53S58 311 aa7.06□□□□□ -1.28
APP-213ENST00000464867 FAHD1Q6P587 224 aa7.06□□□□□ -1.28
APP-213ENST00000464867 Q8N1X5 172 aa7.06□□□□□ -1.28
APP-213ENST00000464867 TCTEX1D1Q8N7M0 179 aa7.06□□□□□ -1.28
APP-213ENST00000464867 CASTOR1Q8WTX7 329 aa7.06□□□□□ -1.28
APP-213ENST00000464867 OTULINQ96BN8 352 aa7.06□□□□□ -1.28
APP-213ENST00000464867 MBOAT4Q96T53 435 aa7.06□□□□□ -1.28
APP-213ENST00000464867 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
APP-213ENST00000464867 PBOV1Q9GZY1 135 aa7.06□□□□□ -1.28
APP-213ENST00000464867 CST11Q9H112 138 aa7.06□□□□□ -1.28
APP-213ENST00000464867 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
APP-213ENST00000464867 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
APP-213ENST00000464867 RNF150Q9ULK6 438 aa7.06□□□□□ -1.28
APP-213ENST00000464867 SPRY2O43597 315 aa7.05□□□□□ -1.28
APP-213ENST00000464867 NPPAP01160 153 aa7.05□□□□□ -1.28
APP-213ENST00000464867 CSTBP04080 98 aaKnown RBP7.05□□□□□ -1.28
APP-213ENST00000464867 CD7P09564 240 aa7.05□□□□□ -1.28
APP-213ENST00000464867 CLUP10909 449 aa7.05□□□□□ -1.28
APP-213ENST00000464867 GLP1RP43220 463 aa7.05□□□□□ -1.28
APP-213ENST00000464867 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
APP-213ENST00000464867 SCN1BQ07699 218 aa7.05□□□□□ -1.28
APP-213ENST00000464867 KLF5Q13887 457 aaPredicted RBP7.05□□□□□ -1.28
APP-213ENST00000464867 MMDQ15546 238 aa7.05□□□□□ -1.28
APP-213ENST00000464867 SAMD4BQ5PRF9 694 aaKnown RBP7.05□□□□□ -1.28
APP-213ENST00000464867 TMEM42Q69YG0 159 aa7.05□□□□□ -1.28
APP-213ENST00000464867 SLC16A13Q7RTY0 426 aa7.05□□□□□ -1.28
APP-213ENST00000464867 GVQW1Q8N7I0 195 aa7.05□□□□□ -1.28
APP-213ENST00000464867 OTOSQ8NHW6 89 aa7.05□□□□□ -1.28
APP-213ENST00000464867 GNPDA2Q8TDQ7 276 aa7.05□□□□□ -1.28
APP-213ENST00000464867 TEAD3Q99594 435 aa7.05□□□□□ -1.28
APP-213ENST00000464867 OSBPL10Q9BXB5 764 aa7.05□□□□□ -1.28
APP-213ENST00000464867 NMNAT2Q9BZQ4 307 aa7.05□□□□□ -1.28
APP-213ENST00000464867 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
APP-213ENST00000464867 MFFQ9GZY8 342 aa7.05□□□□□ -1.28
APP-213ENST00000464867 EGLN3Q9H6Z9 239 aa7.05□□□□□ -1.28
APP-213ENST00000464867 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
APP-213ENST00000464867 NKIRAS1Q9NYS0 192 aa7.05□□□□□ -1.28
APP-213ENST00000464867 CALYQ9NYX4 217 aa7.05□□□□□ -1.28
APP-213ENST00000464867 IL36RNQ9UBH0 155 aa7.05□□□□□ -1.28
APP-213ENST00000464867 TP53TG1Q9Y2A0 90 aa7.05□□□□□ -1.28
APP-213ENST00000464867 TRBV2A0A0J9YWF9 115 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms