RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 HSPB6O14558 160 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 GEMIN2O14893 280 aaKnown RBP13.92□□□□□ -0.18
VPS52-215ENST00000464425 NPFFO15130 113 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 HOXA3O43365 443 aaPredicted RBP13.92□□□□□ -0.18
VPS52-215ENST00000464425 SERPINB10P48595 397 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 UBE2E1P51965 193 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 DLX6P56179 175 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 SCAND1P57086 179 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 RPS27AP62979 156 aaKnown RBP13.92□□□□□ -0.18
VPS52-215ENST00000464425 MEF2CQ06413 473 aaPredicted RBP13.92□□□□□ -0.18
VPS52-215ENST00000464425 AESQ08117 197 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 HCP5Q6MZN7 132 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 ZNF782Q6ZMW2 699 aaPredicted RBP13.92□□□□□ -0.18
VPS52-215ENST00000464425 TM2D1Q9BX74 207 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 TMEM59Q9BXS4 323 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 SELENOIQ9C0D9 397 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 DAPK2Q9UIK4 370 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 RAB22AQ9UL26 194 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 FAM96BQ9Y3D0 163 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 CEPT1Q9Y6K0 416 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 DSCAML1Q8TD84 2053 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 MEIOCA2RUB1 952 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 MPIG6BO95866 241 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 ZNF728P0DKX0 622 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 SLC2A2P11168 524 aaPredicted RBP13.91□□□□□ -0.18
VPS52-215ENST00000464425 RAB6AP20340 208 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 COX7A1P24310 79 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 P2RX3P56373 397 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 ACTG1P63261 375 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 FAM189A2Q15884 450 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 TAF9Q16594 264 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 OR10K2Q6IF99 312 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 Q6YL49 198 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 TCF23Q7RTU1 214 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 FAM46BQ96A09 425 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 ZNF714Q96N38 554 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 URM1Q9BTM9 101 aaKnown RBP13.91□□□□□ -0.18
VPS52-215ENST00000464425 PRDM13Q9H4Q3 707 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 SPACA1Q9HBV2 294 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 ZNF581Q9P0T4 197 aa13.91□□□□□ -0.18
VPS52-215ENST00000464425 TRAV24A0A0B4J272 114 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 TMEM272A0A1B0GTI8 110 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 NOL3O60936 208 aaKnown RBP13.9□□□□□ -0.18
VPS52-215ENST00000464425 OR7C1O76099 320 aaPredicted RBP13.9□□□□□ -0.18
VPS52-215ENST00000464425 CSN2P05814 226 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 MELTFP08582 738 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 ERP29P30040 261 aaKnown RBP13.9□□□□□ -0.18
VPS52-215ENST00000464425 GLIPR1P48060 266 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 ATXN7L3Q14CW9 347 aaPredicted RBP13.9□□□□□ -0.18
VPS52-215ENST00000464425 IDNKQ5T6J7 187 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 TRAPPC6BQ86SZ2 158 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 FAM89BQ8N5H3 189 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 ISOC1Q96CN7 298 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 DCSTAMPQ9H295 470 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 HEXA-AS1Q9H8Q6 139 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 ABRACLQ9P1F3 81 aa13.9□□□□□ -0.18
VPS52-215ENST00000464425 ZNF701M0R085 212 aaPredicted RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 GLAP06280 429 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 SAA4P35542 130 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 KCNJ3P48549 501 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 RORCP51449 518 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 PAX5Q02548 391 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 PAN3Q58A45 887 aaKnown RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 KRBOX4Q5JUW0 171 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 NDNFQ8TB73 568 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 KCTD12Q96CX2 325 aaKnown RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 RBM38Q9H0Z9 239 aaKnown RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 LPAR5Q9H1C0 372 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 KCNK15Q9H427 330 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 RCC2Q9P258 522 aaKnown RBP13.89□□□□□ -0.19
VPS52-215ENST00000464425 ETV7Q9Y603 341 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 LINC00312Q9Y6C7 94 aa13.89□□□□□ -0.19
VPS52-215ENST00000464425 STAB1Q9NY15 2570 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 A0A0B4J203 849 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 FUOMA2VDF0 154 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 H3BMQ9 156 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 CLDN34H7C241 214 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 PAHP00439 452 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 RNASE1P07998 156 aaKnown RBP13.88□□□□□ -0.19
VPS52-215ENST00000464425 FUT3P21217 361 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 DYNC1I2Q13409 638 aaKnown RBP13.88□□□□□ -0.19
VPS52-215ENST00000464425 SPCS2Q15005 226 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 SUMF2Q8NBJ7 301 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 TAF15Q92804 592 aaKnown RBP eCLIP13.88□□□□□ -0.19
VPS52-215ENST00000464425 COQ2Q96H96 371 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 DPCDQ9BVM2 203 aaPredicted RBP13.88□□□□□ -0.19
VPS52-215ENST00000464425 BARHL1Q9BZE3 327 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 NCOR1P1Q9H4R4 102 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 ZMAT3Q9HA38 289 aaKnown RBP13.88□□□□□ -0.19
VPS52-215ENST00000464425 KIAA2026Q5HYC2 2103 aa13.88□□□□□ -0.19
VPS52-215ENST00000464425 TRGV10A0A0A0MS01 117 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 SMIM31A0A1B0GVY4 71 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 ODAMA1E959 279 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 METTL21EPA6NDL7 271 aa13.87□□□□□ -0.19
VPS52-215ENST00000464425 PDCD6O75340 191 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms