RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL4A6-204ENST00000461897 GUK1Q16774 197 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 MIDNQ504T8 468 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 LYZL2Q7Z4W2 148 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 FAM185AQ8N0U4 392 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 CCDC71LQ8N9Z2 235 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 C9orf106Q8NAJ2 232 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 LFNGQ8NES3 379 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 OR2AE1Q8NHA4 323 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 HIST1H2BAQ96A08 127 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SMIM3Q9BZL3 60 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 GLRX2Q9NS18 164 aa10.66□□□□□ -0.7
COL4A6-204ENST00000461897 SPTBN4Q9H254 2564 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 DSPP15924 2871 aaKnown RBP10.65□□□□□ -0.7
COL4A6-204ENST00000461897 SVILO95425 2214 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A10PA6NDY2 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A18PA6NE21 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A16PA6NEW6 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A20PA6NIJ5 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A7PA6NKC0 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A22PA8MWA6 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A12PA8MX19 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A5PA8MXJ8 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A23PA8MXZ1 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 K7ENP7 123 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 CDS2O95674 445 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A15PP0C7V4 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A13PP0C7W8 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A14PP0C7W9 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM90A24PP0C7X0 464 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 AGAP20933 346 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-204ENST00000461897 INO80CQ6PI98 192 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM214BQ7L5A3 538 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 OR1K1Q8NGR3 316 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 ABHD17AQ96GS6 310 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 C19orf12Q9NSK7 152 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF581Q9P0T4 197 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 DKK4Q9UBT3 224 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 ATPIF1Q9UII2 106 aa10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FBXO9Q9UK97 447 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-204ENST00000461897 FAM230AA0A1W2PPH8 454 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 C5orf52A6NGY3 159 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 GEMIN2O14893 280 aaKnown RBP10.64□□□□□ -0.71
COL4A6-204ENST00000461897 SCGB1D2O95969 90 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 LCATP04180 440 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 MAS1LP35410 378 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 RBM11P57052 281 aaKnown RBP10.64□□□□□ -0.71
COL4A6-204ENST00000461897 DAZAP2Q15038 168 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-204ENST00000461897 SP6Q3SY56 376 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 SLC22A25Q6T423 547 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 Q6ZPA2 131 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 SPSB4Q96A44 273 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 MALSU1Q96EH3 234 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 C14orf79Q96F83 325 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 TP53TG5Q9Y2B4 290 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 GTF3C1Q12789 2109 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 PCP4L1A6NKN8 68 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 C1orf196B1AJZ1 125 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 K7N7A8 449 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 UBE2CO00762 179 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 S100A8P05109 93 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 EDN3P14138 238 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 GLP1RP43220 463 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 PPT1P50897 306 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 RND3P61587 244 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 RHEBQ15382 184 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 TBR1Q16650 682 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 PIGYQ3MUY2 71 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 HIKESHIQ53FT3 197 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 AWAT1Q58HT5 328 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 FBXW12Q6X9E4 464 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 FBXL14Q8N1E6 418 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 OR52M1Q8NGK5 317 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-204ENST00000461897 SLC7A11Q9UPY5 501 aa10.64□□□□□ -0.71
COL4A6-204ENST00000461897 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
COL4A6-204ENST00000461897 ZNF816-ZNF321PA0A0X1KG74 233 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 C7orf77A4D0Y5 90 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 PRSS44E7EML9 344 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 DIRAS3O95661 229 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 SMIM6P0DI80 62 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 COX5BP10606 129 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 FUT3P21217 361 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 KIR2DL2P43627 348 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-204ENST00000461897 CAMLGP49069 296 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 PRSS12P56730 875 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 RAB1AP62820 205 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 MALLQ13021 153 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 COLCA1Q6ZS62 124 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 C2CD4CQ8TF44 421 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 EXTL1Q92935 676 aa10.63□□□□□ -0.71
COL4A6-204ENST00000461897 BOD1Q96IK1 185 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms