RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 HIST3H2BBQ8N257 126 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 OR2AJ1Q8NGZ0 328 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 AKR7LQ8NHP1 331 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 MARS2Q96GW9 593 aaKnown RBP13.58□□□□□ -0.24
CMTM3-203ENST00000460097 RCC1LQ96I51 464 aaKnown RBP13.58□□□□□ -0.24
CMTM3-203ENST00000460097 GPER1Q99527 375 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 SPRR3Q9UBC9 169 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 HSF4Q9ULV5 492 aa13.58□□□□□ -0.24
CMTM3-203ENST00000460097 IGKV1-9A0A0C4DH69 117 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 H3BQ15 152 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 PRRG2O14669 202 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 SRP19P09132 144 aaKnown RBP13.57□□□□□ -0.24
CMTM3-203ENST00000460097 GLIPR1P48060 266 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 GFRA1P56159 465 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 NDUFA6P56556 154 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF121P58317 390 aaPredicted RBP13.57□□□□□ -0.24
CMTM3-203ENST00000460097 TAS2R60P59551 318 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 KISS1Q15726 138 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF506Q5JVG8 444 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 RAET1LQ5VY80 246 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 RBMXL1Q96E39 390 aaKnown RBP13.57□□□□□ -0.24
CMTM3-203ENST00000460097 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 C2orf88Q9BSF0 95 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 ANXA10Q9UJ72 324 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 GTF3C1Q12789 2109 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 POLEQ07864 2286 aa13.57□□□□□ -0.24
CMTM3-203ENST00000460097 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 TSTD3H0UI37 97 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 SLC31A2O15432 143 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 PITX3O75364 302 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 CASP6P55212 293 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 SRPXP78539 464 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 POU3F1Q03052 451 aaPredicted RBP13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
CMTM3-203ENST00000460097 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 CRIP3Q6Q6R5 217 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 SSX9Q7RTT3 188 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 RNF144BQ7Z419 303 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 LGI3Q8N145 548 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 FAM57AQ8TBR7 257 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 RAB39BQ96DA2 213 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 TVP23CQ96ET8 276 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
CMTM3-203ENST00000460097 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
CMTM3-203ENST00000460097 PUS1Q9Y606 427 aaKnown RBP eCLIP13.56□□□□□ -0.24
CMTM3-203ENST00000460097 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 A0A0U1RQV5 110 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 A0A1W2PP11 408 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 LIPT2A6NK58 231 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 CDS2O95674 445 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 SFTPDP35247 375 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 TAGLN2P37802 199 aaKnown RBP13.55□□□□□ -0.24
CMTM3-203ENST00000460097 RND2P52198 227 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 B3GALT5-AS1P59052 145 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 SLC25A47Q6Q0C1 308 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 NOXO1Q8NFA2 376 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 BSCL2Q96G97 398 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-203ENST00000460097 NECAP2Q9NVZ3 263 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 ZDHHC8Q9ULC8 765 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 V9GYS6 101 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 FAM230AA0A1W2PPH8 454 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF732B4DXR9 585 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 HBE1P02100 147 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 OR5H8P0DN80 308 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 MMP9P14780 707 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 IL11P20809 199 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 DDTP30046 118 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 PPP1CCP36873 323 aaKnown RBP13.55□□□□□ -0.24
CMTM3-203ENST00000460097 FHITP49789 147 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 PIGPP57054 158 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 UBE2KP61086 200 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 NKX6-1P78426 367 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-203ENST00000460097 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-203ENST00000460097 C3AR1Q16581 482 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF674Q2M3X9 581 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 SLC25A53Q5H9E4 307 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 DOLPP1Q86YN1 238 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 FAM213BQ8TBF2 198 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 Q8WTZ3 238 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 BOD1Q96IK1 185 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 SPACA5Q96QH8 159 aa13.55□□□□□ -0.24
CMTM3-203ENST00000460097 SERINC1Q9NRX5 453 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms