RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SLC25A28Q96A46 364 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 RNF170Q96K19 258 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 GPER1Q99527 375 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CISD1Q9NZ45 108 aaKnown RBP8.75□□□□□ -1.01
USP39-210ENST00000459775 OR5V1Q9UGF6 321 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 KCNIP3Q9Y2W7 256 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CMAHPQ9Y471 501 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 CENPEQ02224 2701 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 FBN2P35556 2912 aa8.75□□□□□ -1.01
USP39-210ENST00000459775 A0A1B0GW15 77 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 DHRS7CA6NNS2 312 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 F8VVB4 439 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 F8VWA3 439 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 AIPO00170 330 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 GRPP07492 148 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ERCC1P07992 297 aaPredicted RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 COX6B1P14854 86 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 MPPED2Q15777 294 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 FAM166AQ6J272 317 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 TGIF2LYQ8IUE0 185 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ZFP82Q8N141 532 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 CSNK2A3Q8NEV1 391 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 NUP37Q8NFH4 326 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 OR8G5Q8NG78 346 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 OR2Z1Q8NG97 314 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 MRPL24Q96A35 216 aaKnown RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 RRNAD1Q96FB5 475 aaKnown RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 ZNF488Q96MN9 340 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ADAT1Q9BUB4 502 aaKnown RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 SEBOXQ9HB31 216 aaPredicted RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 TMEM100Q9NV29 134 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ZNF581Q9P0T4 197 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 IGKV1-12A0A0C4DH73 117 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 FBLL1A6NHQ2 334 aaKnown RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 PDCD5O14737 125 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 SYNGR1O43759 233 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 IGKV1D-12P01611 117 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 IGHV3-13P01766 116 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 MUC1P15941 1255 aaPredicted RBP8.74□□□□□ -1.01
USP39-210ENST00000459775 KITLGP21583 273 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 HTR2CP28335 458 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 CCR6P51684 374 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 MST1LQ2TV78 715 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 CEACAM21Q3KPI0 293 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ZNF826PQ6ZT77 177 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 IZUMO1Q8IYV9 350 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 SAMD12Q8N8I0 201 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 GGACTQ9BVM4 153 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 PLK3Q9H4B4 646 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 BANF2Q9H503 90 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 PSG11Q9UQ72 335 aa8.74□□□□□ -1.01
USP39-210ENST00000459775 ITPR2Q14571 2701 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 IGLV3-9A0A075B6K5 115 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 SLC17A2O00624 439 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 EIF3GO75821 320 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP39-210ENST00000459775 SLC22A5O76082 557 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 EIF4EP06730 217 aaKnown RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 TMEM225BP0DP42 221 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 NPBWR2P48146 333 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 COMPP49747 757 aaPredicted RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 PDCD1Q15116 288 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 OR8G1Q15617 311 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 NKPD1Q17RQ9 610 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 HAGHLQ6PII5 290 aaPredicted RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 GLIPR1L1Q6UWM5 242 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 BTNL3Q6UXE8 466 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 UNQ6126/PRO20091Q6UXV3 157 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 ARRDC1Q8N5I2 433 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 OR8S1Q8NH09 359 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 TNFAIP8L1Q8WVP5 186 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 FAM3DQ96BQ1 224 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 BORCS8Q96FH0 119 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 C1orf147Q96MC9 270 aaPredicted RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 RNF2Q99496 336 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 SHARPINQ9H0F6 387 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 METTL17Q9H7H0 456 aaPredicted RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 ELL3Q9HB65 397 aaPredicted RBP8.73□□□□□ -1.01
USP39-210ENST00000459775 STEAP1Q9UHE8 339 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 ING4Q9UNL4 249 aa8.73□□□□□ -1.01
USP39-210ENST00000459775 SSX4O60224 188 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 CD37P11049 281 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ELK1P19419 428 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 TNFSF8P32971 234 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 PTGFRP43088 359 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ZP1P60852 638 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ZNF672Q499Z4 452 aaPredicted RBP8.72□□□□□ -1.01
USP39-210ENST00000459775 SLC22A6Q4U2R8 563 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 C1orf100Q5SVJ3 147 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 RBPMS2Q6ZRY4 209 aaKnown RBP8.72□□□□□ -1.01
USP39-210ENST00000459775 SLC25A26Q70HW3 274 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 S100A7AQ86SG5 101 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 C10orf35Q96D05 121 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SLC25A38Q96DW6 304 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SEH1LQ96EE3 360 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 TMEM204Q9BSN7 226 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms