RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ASXL3Q9C0F0 2248 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 CACNA1HO95180 2353 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SLC22A20A6NK97 555 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM210A6NLX4 147 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 FAM90A26D6RGX4 464 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 CNOT4O95628 575 aaKnown RBP7.58□□□□□ -1.2
HDAC3-202ENST00000459727 LY86O95711 162 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 IFNA5P01569 189 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SERPINE2P07093 398 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 ACAA1P09110 424 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-202ENST00000459727 PRKACAP17612 351 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 PTAFRP25105 342 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 F2RP25116 425 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 PPT1P50897 306 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TAS2R30P59541 319 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 HBG1P69891 147 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 HBG2P69892 147 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SLC10A1Q14973 349 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 NMSQ5H8A3 153 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 AKR1C8PQ5T2L2 129 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 FBXW9Q5XUX1 488 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SPINK14Q6IE38 97 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 CBLN2Q8IUK8 224 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TUSC5Q8IXB3 177 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 LINC00518Q8N0U6 118 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 FAM58AQ8N1B3 248 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF561Q8N587 486 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 IL22RA1Q8N6P7 574 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TCTEX1D1Q8N7M0 179 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 SUMF2Q8NBJ7 301 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 OR52M1Q8NGK5 317 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 OR8U1Q8NH10 309 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 FGFBP3Q8TAT2 258 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 ATP5SQ99766 215 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM231Q9H6L2 316 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 FAM96BQ9Y3D0 163 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 WSB1Q9Y6I7 421 aa7.58□□□□□ -1.2
HDAC3-202ENST00000459727 TRAV1-1A0A0B4J248 108 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 FAM221AA4D161 298 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 PINLYPA6NC86 204 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 NKX2-6A6NCS4 301 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 C9orf172C9J069 976 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 AGPAT2O15120 278 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 ADAM20O43506 726 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 NDUFS6O75380 124 aaKnown RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 HLA-HP01893 362 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 HSPB1P04792 205 aaKnown RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 SP1P08047 785 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 OR8U8P0C7N1 319 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 CCNOP22674 350 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 LMO1P25800 156 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 NPBWR2P48146 333 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 ARHGDIBP52566 201 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 SRYQ05066 204 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 MZT1Q08AG7 82 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 CLINT1Q14677 625 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 IGSF11Q5DX21 431 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 SOHLH1Q5JUK2 328 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 H1FOOQ8IZA3 346 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 GAPTQ8N292 157 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 ZFP62Q8NB50 900 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 HSD17B11Q8NBQ5 300 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 MDS2Q8NDY4 140 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 OR10G4Q8NGN3 311 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 OR1K1Q8NGR3 316 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 OR11L1Q8NGX0 322 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 RNASE11Q8TAA1 199 aaKnown RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 FAM213BQ8TBF2 198 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 MRPL30Q8TCC3 161 aaKnown RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 DYRK2Q92630 601 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 GMPPAQ96IJ6 420 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 PARD6GQ9BYG4 376 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-202ENST00000459727 RPS10P5Q9NQ39 176 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 ALPK2Q86TB3 2170 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 EML6Q6ZMW3 1958 aa7.57□□□□□ -1.2
HDAC3-202ENST00000459727 A0A087WWC5 75 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 CXorf65A6NEN9 183 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 M0R036 132 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 TGOLN2O43493 480 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 SSSCA1O60232 199 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-202ENST00000459727 S100A6P06703 90 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 MAGEA5P43359 124 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 MEOX1P50221 254 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 SULT1A1P50225 295 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 UBE2NP61088 152 aaKnown RBP7.56□□□□□ -1.2
HDAC3-202ENST00000459727 AWAT1Q58HT5 328 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF818PQ6ZRF7 136 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 OR10V1Q8NGI7 309 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 RXFP4Q8TDU9 374 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms