RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FBLP22087 321 aaKnown RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 IDH3GP51553 393 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 EIF3IQ13347 325 aaKnown RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 PLPPR5Q32ZL2 321 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 NMSQ5H8A3 153 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 BTNL3Q6UXE8 466 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 DPPA3Q6W0C5 159 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 FAM185AQ8N0U4 392 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 GJC3Q8NFK1 279 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 OR51G1Q8NGK1 321 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 OR1L3Q8NH93 324 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 SMIM7Q9BQ49 75 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 Q9N2K0 584 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 WNT16Q9UBV4 365 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 IL17BQ9UHF5 180 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 VAX2Q9UIW0 290 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PPP5D1E7EU14 171 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 NPSP0C0P6 89 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 CTHP32929 405 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 GALR1P47211 349 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 ERVFC1-1P60608 527 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 RPS18P62269 152 aaKnown RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 DLX2Q07687 328 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 HNF4GQ14541 408 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 NCR3LG1Q68D85 454 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF295-AS1Q8N0V1 137 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 OR2V1Q8NHB1 315 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PYGO2Q9BRQ0 406 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF442Q9H7R0 627 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 FBRSQ9HAH7 460 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PLEK2Q9NYT0 353 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PLA2G3Q9NZ20 509 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 TAAR3PQ9P1P4 343 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 IGKV1D-13A0A0B4J2D9 117 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 A0A0G2JRQ6 117 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 A0A1B0GUS0 222 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 HMGB3O15347 200 aaKnown RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 IFNA5P01569 189 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 IGKV1-13P0DP09 117 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 GABRG2P18507 467 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 MSR1P21757 451 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 GUCA1AP43080 201 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 RPL29P47914 159 aaKnown RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PDLIM4P50479 330 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 SRPXP78539 464 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 IL24Q13007 206 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 HERPUD1Q15011 391 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 OSR2Q8N2R0 312 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 RPUSD4Q96CM3 377 aaKnown RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-208ENST00000456385 OXGR1Q96P68 337 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 PRSS50Q9UI38 385 aa8.87□□□□□ -0.99
CLIP4-208ENST00000456385 ASXL3Q9C0F0 2248 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 CHD3Q12873 2000 aaKnown RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 LRRC3CA6NJW4 275 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 C5orf67F2Z3F1 127 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 RAB4AP20338 218 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 WNT5AP41221 380 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 FASLGP48023 281 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 ARL16Q0P5N6 197 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 DAZAP2Q15038 168 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 IQCJQ1A5X6 159 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 BADQ92934 168 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM18Q96B42 140 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 BORCS8Q96FH0 119 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 MRGPRX4Q96LA9 322 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 RBM24Q9BX46 236 aaKnown RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 PIAS3Q9Y6X2 628 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 RALGAPA1Q6GYQ0 2036 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 IGHV3-15A0A0B4J1V0 119 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 B4E171 279 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 OR7C1O76099 320 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 SCTP09683 121 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 CD33P20138 364 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 VDAC1P21796 283 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 OTX1P32242 354 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 TSPAN7P41732 249 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 NPBWR2P48146 333 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 BSXQ3C1V8 233 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 OR10G3Q8NGC4 313 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 NABP1Q96AH0 204 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 SPSB1Q96BD6 273 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF385AQ96PM9 386 aaKnown RBP8.86□□□□□ -0.99
CLIP4-208ENST00000456385 SEMA5BQ9P283 1151 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 MYOTQ9UBF9 498 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
CLIP4-208ENST00000456385 KIAA0100Q14667 2235 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms