RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 YIF1AO95070 293 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 FAM90A15PP0C7V4 464 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 FAM90A13PP0C7W8 464 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 FAM90A14PP0C7W9 464 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 FAM90A24PP0C7X0 464 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 CEACAM6P40199 344 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 HERV-K104P61576 105 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 IL24Q13007 206 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 ICAM4Q14773 271 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 EXT1Q16394 746 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 TMEM211Q6ICI0 200 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 IGFL3Q6UXB1 125 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 LHFPL2Q6ZUX7 228 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 GALNTL5Q7Z4T8 443 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 LYZL2Q7Z4W2 148 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 C1QL2Q7Z5L3 287 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 AKR7LQ8NHP1 331 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 Q8WTZ3 238 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 TMEM54Q969K7 222 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 TMEM56Q96MV1 263 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 TECTBQ96PL2 329 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 EMC6Q9BV81 110 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 VN1R1Q9GZP7 353 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 AK3Q9UIJ7 227 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 RNF150Q9ULK6 438 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 TMEM56-RWDD3S4R434 201 aa8.65□□□□□ -1.02
CHCHD4P3-201ENST00000455954 KIAA1549Q9HCM3 1950 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 A0A087WZY1 265 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 OR5H15A6NDH6 313 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 OR5H1A6NKK0 313 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 ZNF850A8MQ14 1090 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 DVL1O14640 695 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 SLC31A2O15432 143 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BKO60814 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BJP06899 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 CYC1P08574 325 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 QDPRP09417 244 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 COX6A1P12074 109 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BOP23527 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 UCP1P25874 307 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BBP33778 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 GUCA1AP43080 201 aaPredicted RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 NKX2-1P43699 371 aaPredicted RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 EFNA3P52797 238 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BDP58876 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 TAS2R60P59551 318 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BCP62807 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 VAMP2P63027 116 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 DLK1P80370 383 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 TAF9Q16594 264 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST2H2BEQ16778 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 C9orf152Q5JTZ5 239 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 AKR1C8PQ5T2L2 129 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 C6orf201Q7Z4U5 140 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 ZNF100Q8IYN0 542 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 ZADH2Q8N4Q0 377 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HSD17B11Q8NBQ5 300 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 NFAM1Q8NET5 270 aaPredicted RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 POC1BQ8TC44 478 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BHQ93079 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 SPTSSAQ969W0 71 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 NOL4LQ96MY1 436 aaPredicted RBP8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 P2RX4Q99571 388 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BNQ99877 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 HIST1H2BMQ99879 126 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 SOX7Q9BT81 388 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 PITPNC1Q9UKF7 332 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 PIEZO2Q9H5I5 2752 aa8.64□□□□□ -1.03
CHCHD4P3-201ENST00000455954 ALPK2Q86TB3 2170 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 ATMQ13315 3056 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 TNRC6AQ8NDV7 1962 aaKnown RBP8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 LOC102723996A0A087X1L8 192 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 IGHV1-45A0A0A0MS14 117 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 IGSF23A1L1A6 192 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 CLDN34H7C241 214 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 MSTNO14793 375 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 RER1O15258 196 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 XRCC2O43543 280 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 RAMP1O60894 148 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 VAMP5O95183 116 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 DIRAS3O95661 229 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 CYB5R3P00387 301 aaPredicted RBP8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 OPN1MWP04001 364 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 WNT2P09544 360 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
CHCHD4P3-201ENST00000455954 SLC25A6P12236 298 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms