RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GNB3P16520 340 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 INPP1P49441 399 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 DVL1P1P54792 670 aaPredicted RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 TMEM50BP56557 158 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 GNG2P59768 71 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 MADCAM1Q13477 382 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 DCTN2Q13561 401 aaKnown RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 GRK1Q15835 563 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 PLAC9Q5JTB6 97 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 TRIQKQ629K1 86 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 SIGIRRQ6IA17 410 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 C16orf87Q6PH81 154 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 CLEC9AQ6UXN8 241 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 Q71RC1 249 aaPredicted RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 SUMF2Q8NBJ7 301 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 PPP1R35Q8TAP8 253 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 DCTN5Q9BTE1 182 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 PECRQ9BY49 303 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 YAE1D1Q9NRH1 226 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 C19orf12Q9NSK7 152 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
VPS33A-202ENST00000451053 MALRD1Q5VYJ5 2156 aa10.77□□□□□ -0.69
VPS33A-202ENST00000451053 PPIAL4CA0A0B4J2A2 164 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 TMEM235A6NFC5 223 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 J3QRK9 145 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 GPR37O15354 613 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 UPK1BO75841 260 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ECDO95905 644 aaPredicted RBP10.76□□□□□ -0.69
VPS33A-202ENST00000451053 CD3GP09693 182 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 CBX5P45973 191 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 KCNJ3P48549 501 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ACTBP60709 375 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ACTG1P63261 375 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 EDDM3AQ14507 147 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ATXN7L3Q14CW9 347 aaPredicted RBP10.76□□□□□ -0.69
VPS33A-202ENST00000451053 CD276Q5ZPR3 534 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 BRICD5Q6PL45 260 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 C6orf201Q7Z4U5 140 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 BPIFB2Q8N4F0 458 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 OR5D13Q8NGL4 314 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ZFAND2BQ8WV99 257 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 DPCDQ9BVM2 203 aaPredicted RBP10.76□□□□□ -0.69
VPS33A-202ENST00000451053 ING3Q9NXR8 418 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 INSIG2Q9Y5U4 225 aa10.76□□□□□ -0.69
VPS33A-202ENST00000451053 MAST4O15021 2626 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 ACANP16112 2415 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 KIR2DS1A0A191URI9 304 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 MEX3AA1L020 520 aaKnown RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 MGST3O14880 152 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 ENSAO43768 121 aaKnown RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 RBBP9O75884 186 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 GSTT2BP0CG30 244 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 IL7P13232 177 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 EDDM3BP56851 147 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 DGCR2P98153 550 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 C11orf91Q3C1V1 193 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 DCAF12L2Q5VW00 463 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 RTN4RL2Q86UN3 420 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 FAM185AQ8N0U4 392 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 LY6G5BQ8NDX9 201 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 PLPPR1Q8TBJ4 325 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 NEK7Q8TDX7 302 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 GPX8Q8TED1 209 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 COQ2Q96H96 371 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 SDHCQ99643 169 aaPredicted RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 THAP7Q9BT49 309 aaPredicted RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 ZMAT3Q9HA38 289 aaKnown RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 TAS2R8Q9NYW2 309 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 KCNS2Q9ULS6 477 aa10.75□□□□□ -0.69
VPS33A-202ENST00000451053 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
VPS33A-202ENST00000451053 HIVEP1P15822 2718 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 TRBV23-1A0A0A0MS06 115 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 A8MV72 311 aaPredicted RBP10.74□□□□□ -0.69
VPS33A-202ENST00000451053 CSN2P05814 226 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 PPIAL4GP0DN37 164 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 GLIPR1P48060 266 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 P2RX3P56373 397 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 AP3S2P59780 193 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 RPL31P62899 125 aaKnown RBP10.74□□□□□ -0.69
VPS33A-202ENST00000451053 AESQ08117 197 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 ZNF273Q14593 569 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 TMEM200BQ69YZ2 307 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 FAHD2BQ6P2I3 314 aaPredicted RBP10.74□□□□□ -0.69
VPS33A-202ENST00000451053 BTNL3Q6UXE8 466 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 TCF23Q7RTU1 214 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 TRAPPC6BQ86SZ2 158 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 OR52I2Q8NH67 350 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 DYRK2Q92630 601 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 FAHD2AQ96GK7 314 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 CMSS1Q9BQ75 279 aaKnown RBP10.74□□□□□ -0.69
VPS33A-202ENST00000451053 SULT4A1Q9BR01 284 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 FAAP24Q9BTP7 215 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms