RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR9G1Q8NH87 305 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 TFAP2CQ92754 450 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 ZNF184Q99676 751 aaPredicted RBP15.54■□□□□ 0.08
USP40-207ENST00000450940 DPCDQ9BVM2 203 aaPredicted RBP15.54■□□□□ 0.08
USP40-207ENST00000450940 LIN7BQ9HAP6 207 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 PCDHB16Q9NRJ7 776 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 ZNF581Q9P0T4 197 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 CKLFQ9UBR5 152 aa15.54■□□□□ 0.08
USP40-207ENST00000450940 MAGEA13PA6NCF6 341 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 IL1AP01583 271 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 CSTBP04080 98 aaKnown RBP15.53■□□□□ 0.08
USP40-207ENST00000450940 GLP1RP43220 463 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 MPV17LQ2QL34 196 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 TPTE2P1Q5T6R2 138 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 Q6ZS46 218 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 SLC16A12Q6ZSM3 486 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 LYPD6Q86Y78 171 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 CDH26Q8IXH8 852 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 NANOGP1Q8N7R0 232 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 FAM110DQ8TAY7 271 aaPredicted RBP15.53■□□□□ 0.08
USP40-207ENST00000450940 IDI2-AS1Q9NZ38 188 aa15.53■□□□□ 0.08
USP40-207ENST00000450940 ARHGDIBP52566 201 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 WNT4P56705 351 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 DOC2BQ14184 412 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 GPR176Q14439 515 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 PDLIM3Q53GG5 364 aaPredicted RBP15.52■□□□□ 0.08
USP40-207ENST00000450940 RNLSQ5VYX0 342 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 AHSA2Q719I0 299 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 OR14A2Q96R54 314 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 S100A13Q99584 98 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 OCSTAMPQ9BR26 566 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 MMP28Q9H239 520 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 DCLRE1BQ9H816 532 aa15.52■□□□□ 0.08
USP40-207ENST00000450940 J3QR06 171 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 GEMIN2O14893 280 aaKnown RBP15.51■□□□□ 0.07
USP40-207ENST00000450940 PLXNB1O43157 2135 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 OR7C1O76099 320 aaPredicted RBP15.51■□□□□ 0.07
USP40-207ENST00000450940 GTF2F2P13984 249 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 GZMHP20718 246 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 NFYBP25208 207 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 CCDC144NLQ6NUI1 221 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 STX19Q8N4C7 294 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 C11orf44Q8N8P7 122 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 BPIFB6Q8NFQ5 453 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 MRGPRDQ8TDS7 321 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 MRPS24Q96EL2 167 aaKnown RBP15.51■□□□□ 0.07
USP40-207ENST00000450940 AKR1E2Q96JD6 320 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 DERL3Q96Q80 235 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 PSG11Q9UQ72 335 aa15.51■□□□□ 0.07
USP40-207ENST00000450940 FAM90A18PA6NE21 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A16PA6NEW6 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A20PA6NIJ5 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A9PA6NNJ1 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A12PA8MX19 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A5PA8MXJ8 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 ANKRD65E5RJM6 399 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 PIN1P1O15428 100 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FBXO24O75426 580 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 OR2F2O95006 317 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A15PP0C7V4 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A13PP0C7W8 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A14PP0C7W9 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FAM90A24PP0C7X0 464 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 CELP19835 753 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 SERPINA2P20848 420 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 CD24P25063 80 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 SLC22A6Q4U2R8 563 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 FBLN7Q53RD9 439 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 THNSL2Q86YJ6 484 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 THRSPQ92748 146 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 RBM14Q96PK6 669 aaKnown RBP15.5■□□□□ 0.07
USP40-207ENST00000450940 VCXQ9H320 206 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 AMMECR1Q9Y4X0 333 aaPredicted RBP15.5■□□□□ 0.07
USP40-207ENST00000450940 TGP01266 2768 aa15.5■□□□□ 0.07
USP40-207ENST00000450940 A0A1W2PP11 408 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 A0A1W2PPK0 400 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 TMEM30CPA0ZSE6 113 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 MYL12BO14950 172 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 OPN1MWP04001 364 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 OPN1MW2P0DN77 364 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 OPN1MW3P0DN78 364 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 CD28P10747 220 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 SSTR5P35346 364 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 HIST2H2BDQ6DRA6 164 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 RFESDQ8TAC1 157 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 SLC25A33Q9BSK2 321 aa15.49■□□□□ 0.07
USP40-207ENST00000450940 RCC2Q9P258 522 aaKnown RBP15.49■□□□□ 0.07
USP40-207ENST00000450940 NKX1-2Q9UD57 310 aaPredicted RBP15.49■□□□□ 0.07
USP40-207ENST00000450940 MRPS28Q9Y2Q9 187 aaKnown RBP15.49■□□□□ 0.07
USP40-207ENST00000450940 TRAV39A0A0B4J263 110 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 PNMA8CA0A1B0GUJ8 204 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 ADARB2-AS1A8MUL3 147 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 C15orf65H3BRN8 121 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 MT-ND4P03905 459 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 AMY1AP04745 511 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 AMY2AP04746 511 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 CDK1P06493 297 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 MNDAP41218 407 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 VDAC2P45880 294 aaPredicted RBP15.48■□□□□ 0.07
USP40-207ENST00000450940 EMX1Q04741 257 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms