RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GAGE6Q13070 117 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SQSTM1Q13501 440 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CD300EQ496F6 205 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 PRRT3Q5FWE3 981 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 RFLNAQ6ZTI6 216 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 H2BFWTQ7Z2G1 175 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CTU1Q7Z7A3 348 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 OR5AS1Q8N127 324 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ZBTB34Q8NCN2 500 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 KREMEN2Q8NCW0 462 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NPEPL1Q8NDH3 523 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR1L4Q8NGR5 311 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OTOSQ8NHW6 89 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SLC25A40Q8TBP6 338 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NDRG1Q92597 394 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TMEM56Q96MV1 263 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 MRPL13Q9BYD1 178 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 MAP1LC3AQ9H492 121 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PLAC1Q9HBJ0 212 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 WFDC1Q9HC57 220 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TNFRSF12AQ9NP84 129 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SEMA5BQ9P283 1151 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SERGEFQ9UGK8 458 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 USP21Q9UK80 565 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 NXT1Q9UKK6 140 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 TSC2P49815 1807 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 ARID2Q68CP9 1835 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 YLPM1P49750 1951 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 IGLV3-10A0A075B6K4 115 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TRBV5-7A0A0A0MS05 114 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 A0A1B0GWA3 101 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 BMPR1BO00238 502 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PPIHO43447 177 aaKnown RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LEPROTL1O95214 131 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 APOMO95445 188 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C1orf105O95561 183 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TOMM40O96008 361 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 COX6CP09669 75 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 UQCRFS1P47985 274 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PFN3P60673 137 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.95□□□□□ -2.1
USP53-202ENST00000450251 Q1RN00 199 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 CT83Q5H943 113 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TPTE2P1Q5T6R2 138 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 SLC48A1Q6P1K1 146 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 APCDD1LQ8NCL9 501 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 OR5D13Q8NGL4 314 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 TNFRSF13CQ96RJ3 184 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 PTPN18Q99952 460 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 C19orf24Q9BVV8 132 aa1.95□□□□□ -2.1
USP53-202ENST00000450251 RSPO3Q9BXY4 272 aaPredicted RBP1.95□□□□□ -2.1
USP53-202ENST00000450251 LOC102724200A0A096LPH7 203 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 TRBV5-4A0A0C4DH59 114 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GAGE12BA1L429 117 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 OTOL1A6NHN0 477 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 C17orf51A8MQB3 221 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CEACAM1P13688 526 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 VDAC1P21796 283 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 HIST1H1TP22492 207 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 CST5P28325 142 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 IER3P46695 156 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ZFP36L2P47974 494 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 UCP3P55916 312 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FOXL1Q12952 345 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ELAVL3Q14576 367 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 CD226Q15762 336 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PHLDA2Q53GA4 152 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GCSAMLQ5JQS6 135 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 COA6Q5JTJ3 125 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 TMEM164Q5U3C3 297 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PAQR9Q6ZVX9 377 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SAMD7Q7Z3H4 446 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ATP5L2Q7Z4Y8 100 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 RTN4RL2Q86UN3 420 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 NR2C2APQ86WQ0 139 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 OR51H1Q8NH63 302 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PRSS3P2Q8NHM4 247 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SGMS2Q8NHU3 365 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DNASE2BQ8WZ79 361 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 EAF1Q96JC9 268 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 OR4C12Q96R67 309 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DIRC2Q96SL1 478 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 MGST2Q99735 147 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TXNRD2Q9NNW7 524 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SH2D2AQ9NP31 389 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PRTFDC1Q9NRG1 225 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TECRQ9NZ01 308 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 FOXD3Q9UJU5 478 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 GPR132Q9UNW8 380 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TIMM13Q9Y5L4 95 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PR80 420 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ANKRD30BLA7E2S9 258 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C11orf98E9PRG8 122 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 H0YL77 283 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GYPBP06028 91 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM87AP0C7U9 286 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ARSAP15289 507 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FBLP22087 321 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 ANOS1P23352 680 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms