RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 ZNF468Q5VIY5 522 aaPredicted RBP13.65□□□□□ -0.22
CHRD-205ENST00000448472 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 ADPRHL1Q8NDY3 354 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 RBMXL1Q96E39 390 aaKnown RBP13.65□□□□□ -0.22
CHRD-205ENST00000448472 HIST1H2AAQ96QV6 131 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
CHRD-205ENST00000448472 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
CHRD-205ENST00000448472 SELENOHQ8IZQ5 122 aaKnown RBP13.65□□□□□ -0.22
CHRD-205ENST00000448472 RBM11P57052 281 aaKnown RBP13.64□□□□□ -0.23
CHRD-205ENST00000448472 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 R4GN57 208 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 ARHGAP21Q5T5U3 1957 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 TMEM50AO95807 157 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 BCL3P20749 454 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 C17orf82Q86X59 251 aaPredicted RBP13.64□□□□□ -0.23
CHRD-205ENST00000448472 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 FOXB1Q99853 325 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 LAMP3Q9UQV4 416 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 CD300LBA8K4G0 201 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 VDAC1P21796 283 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 GLIPR1P48060 266 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 PSG4Q00888 419 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
CHRD-205ENST00000448472 LRP4O75096 1905 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 IFNA10P01566 189 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 CTSSP25774 331 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 LTBRP36941 435 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 CCL7P80098 99 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 OR56B2PQ8NGI1 322 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 SRXN1Q9BYN0 137 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 SMOC1Q9H4F8 434 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 FOXD3Q9UJU5 478 aaPredicted RBP13.63□□□□□ -0.23
CHRD-205ENST00000448472 EML6Q6ZMW3 1958 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 ZNF816-ZNF321PA0A0X1KG74 233 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 IGLV3-19P01714 112 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
CHRD-205ENST00000448472 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 SLC25A53Q5H9E4 307 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 TCEAL6Q6IPX3 200 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 MRPL21Q7Z2W9 205 aaKnown RBP13.63□□□□□ -0.23
CHRD-205ENST00000448472 ATP5SQ99766 215 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 SMIM7Q9BQ49 75 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 CALHM2Q9HA72 323 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 ERRFI1Q9UJM3 462 aaPredicted RBP13.63□□□□□ -0.23
CHRD-205ENST00000448472 CHCHD2Q9Y6H1 151 aaPredicted RBP13.63□□□□□ -0.23
CHRD-205ENST00000448472 LOC102725191A0A1B0GVB3 256 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 TRAPPC2LH3BP13 241 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 DFFBO76075 338 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 SSX2Q16385 188 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 BEND4Q6ZU67 534 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 C1QL4Q86Z23 238 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 ZNF488Q96MN9 340 aa13.63□□□□□ -0.23
CHRD-205ENST00000448472 A0A1W2PPQ1 181 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 CYTIPO60759 359 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 CLN3Q13286 438 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 MKXQ8IYA7 352 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 CLDND2Q8NHS1 167 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 TMEM37Q8WXS4 190 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 C10orf35Q96D05 121 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 SLC39A9Q9NUM3 307 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 PTBP3O95758 552 aaKnown RBP13.62□□□□□ -0.23
CHRD-205ENST00000448472 DDTP30046 118 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 SSR4P51571 173 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 C10orf128Q5T292 105 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 KMT5CQ86Y97 462 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 FGFBP3Q8TAT2 258 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 PSMF1Q92530 271 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 CELSR3Q9NYQ7 3312 aa13.62□□□□□ -0.23
CHRD-205ENST00000448472 WDR1O75083 606 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 UCP2P55851 309 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 TAS2R30P59541 319 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 TMEM211Q6ICI0 200 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 RPS19BP1Q86WX3 136 aaKnown RBP13.61□□□□□ -0.23
CHRD-205ENST00000448472 LHX4Q969G2 390 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 CACNG5Q9UF02 275 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 HIST1H1BP16401 226 aaKnown RBP13.61□□□□□ -0.23
CHRD-205ENST00000448472 BMP5P22003 454 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 RAB30Q15771 203 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 HLA-BQ31612 363 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 HIST3H2BBQ8N257 126 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 DECR2Q9NUI1 292 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 DOCK11Q5JSL3 2073 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 DNAJC13O75165 2243 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 PSG2P11465 335 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 DSCR4P56555 118 aaPredicted RBP13.61□□□□□ -0.23
CHRD-205ENST00000448472 ZNF506Q5JVG8 444 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 FAM185AQ8N0U4 392 aa13.61□□□□□ -0.23
CHRD-205ENST00000448472 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms