RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CCL23P55773 120 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ACTBP60709 375 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ACTG1P63261 375 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 CKAP4Q07065 602 aaKnown RBP2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 PSG7Q13046 419 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 HLA-DRB5Q30154 266 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 Q499Y3 187 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ATP6AP1LQ52LC2 224 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SMUG1Q53HV7 270 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 TMEM31Q5JXX7 168 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 LPCAT4Q643R3 524 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 CALHM1Q8IU99 346 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 WDFY1Q8IWB7 410 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC26A10Q8NG04 563 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR4M2Q8NGB6 313 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR52E4Q8NGH9 312 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 COQ8AQ8NI60 647 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 CCL17Q92583 94 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 PHYHIPLQ96FC7 376 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 FGF23Q9GZV9 251 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC25A31Q9H0C2 315 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR51V1Q9H2C8 321 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 POMKQ9H5K3 350 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ASB8Q9H765 288 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAM206AQ9NX38 181 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 NYAP2Q9P242 653 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 TP53TG1Q9Y2A0 90 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 CACNG2Q9Y698 323 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 MEGF6O75095 1541 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SBF2Q86WG5 1849 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 DAPK1P53355 1430 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 SPATA31E1Q6ZUB1 1445 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ANKARQ7Z5J8 1434 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CHD8Q9HCK8 2581 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRAV8-2A0A0B4J237 113 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A0U1RQV1 116 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 LOC389332A0A1B0GUA5 103 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 M0R036 132 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 AZIN1O14977 448 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 MAGEB4O15481 346 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CHST10O43529 356 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 PDCD6O75340 191 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ASS1P00966 412 aaKnown RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 IGLV2-8P01709 118 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 SPNP16150 400 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 AKR1C4P17516 323 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ELK1P19419 428 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 IL3RAP26951 378 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 KIR3DL2P43630 455 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM53BQ14153 422 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CLEC12BQ2HXU8 276 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF404Q494X3 552 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 TSPO2Q5TGU0 170 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 XKRXQ6PP77 449 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 SLC16A13Q7RTY0 426 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM19A5Q7Z5A7 132 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CPNE9Q8IYJ1 553 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 C10orf67Q8IYJ2 551 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 LRRC34Q8IZ02 419 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 KRT222Q8N1A0 295 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 Q8N976 141 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR2M7Q8NG81 312 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR4M1Q8NGD0 313 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR1L1Q8NH94 360 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF420Q8TAQ5 688 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 PIGXQ8TBF5 258 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 NEURL3Q96EH8 262 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 SMIM12Q96EX1 92 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CYYR1Q96J86 154 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZIM3Q96PE6 472 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF649Q9BS31 505 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 TMEM208Q9BTX3 173 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 CDCA4Q9BXL8 241 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR51E2Q9H255 320 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 FBXL15Q9H469 300 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 ASB7Q9H672 318 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 PLEKHF2Q9H8W4 249 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 C12orf10Q9HB07 376 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 DDX19AQ9NUU7 478 aaKnown RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 TAS2R9Q9NYW1 312 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR12D3Q9UGF7 316 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 FARSAQ9Y285 508 aaKnown RBP2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 LRRC42Q9Y546 428 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 INSIG2Q9Y5U4 225 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 NUP155O75694 1391 aa2.96□□□□□ -1.94
HMGB1P48-201ENST00000446155 VWA8A3KMH1 1905 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 TOPAZ1Q8N9V7 1692 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 CACNA1GO43497 2377 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 PKD1L2Q7Z442 2459 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 IQGAP3Q86VI3 1631 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR5H1A6NKK0 313 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 C21orf140B9A014 251 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 H3BP45 60 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 CXCR6O00574 342 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 FFAR1O14842 300 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms