RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 DCUN1D4Q92564 292 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 MSL2Q9HCI7 577 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 PRR13Q9NZ81 148 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 WIPI2Q9Y4P8 454 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
SNX13-204ENST00000444712 LINC00862A6NCI5 91 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 C16orf97H3BN30 126 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 BCL2L11O43521 198 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 PTBP3O95758 552 aaKnown RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 AP2S1P53680 142 aaPredicted RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 FAM90A1Q86YD7 464 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 CMTM1Q8IZ96 169 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 SCARB1Q8WTV0 552 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 OR10C1Q96KK4 312 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 GSX2Q9BZM3 304 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 SLC5A7Q9GZV3 580 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 CELSR3Q9NYQ7 3312 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 IGLV3-9A0A075B6K5 115 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 hCG_1807616A0A1W2PRN6 198 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 TMEM30CPA0ZSE6 113 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 RNF222A6NCQ9 220 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 MPPED1O15442 326 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 ZNF205O95201 554 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 CFDP00746 253 aaPredicted RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 SMCO1Q147U7 214 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 ALKBH2Q6NS38 261 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 C20orf204Q6ZNR8 217 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 OR2Z1Q8NG97 314 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 LILRB1Q8NHL6 650 aaPredicted RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 SECTM1Q8WVN6 248 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 MBNL3Q9NUK0 354 aaKnown RBP13.25□□□□□ -0.29
SNX13-204ENST00000444712 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 DNAJB11Q9UBS4 358 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 OR14J1Q9UGF5 321 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 OR2W1Q9Y3N9 320 aa13.25□□□□□ -0.29
SNX13-204ENST00000444712 C3orf85A0A1B0GTC6 90 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 GNRHRP30968 328 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 IL15RAQ13261 267 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 ATXN7L3Q14CW9 347 aaPredicted RBP13.24□□□□□ -0.29
SNX13-204ENST00000444712 GGNBP1Q5YKI7 109 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 SLC35E4Q6ICL7 350 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 H1FOOQ8IZA3 346 aaPredicted RBP13.24□□□□□ -0.29
SNX13-204ENST00000444712 PLPPR1Q8TBJ4 325 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
SNX13-204ENST00000444712 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 KIF25Q9UIL4 384 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 TMED3Q9Y3Q3 217 aa13.24□□□□□ -0.29
SNX13-204ENST00000444712 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
SNX13-204ENST00000444712 IGKV1-6A0A0C4DH72 117 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 DUXBA0A1W2PPF3 345 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 ERVH48-1M5A8F1 160 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 PHF1O43189 567 aaPredicted RBP13.23□□□□□ -0.29
SNX13-204ENST00000444712 RLN2P04090 185 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 RCC1P18754 421 aaPredicted RBP13.23□□□□□ -0.29
SNX13-204ENST00000444712 PTAFRP25105 342 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 CD40P25942 277 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 CFHR2P36980 270 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 PCSK4Q6UW60 755 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 ZNF826PQ6ZT77 177 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 APC2O95996 2303 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 HMGN3Q15651 99 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 GLYATL2Q8WU03 294 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 TMEM171Q8WVE6 324 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 MSI2Q96DH6 328 aaKnown RBP13.23□□□□□ -0.29
SNX13-204ENST00000444712 C18orf12Q96KH6 178 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 UFSP2Q9NUQ7 469 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 RAXQ9Y2V3 346 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 ACACAQ13085 2346 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 ZGRF1Q86YA3 2104 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 LOC400499M0QZD8 3231 aa13.23□□□□□ -0.29
SNX13-204ENST00000444712 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 IGHV3-64DA0A0J9YX35 117 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 RPS10-NUDT3A0A1W2PQS6 291 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 MPTX1A8MV57 137 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 CASP6P55212 293 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 RAB32Q13637 225 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 TBC1D26Q86UD7 250 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 OR11L1Q8NGX0 322 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 LRRC29Q8WV35 223 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 RND1Q92730 232 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
SNX13-204ENST00000444712 PHYHIPLQ96FC7 376 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 RNF126Q9BV68 326 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms